CN187736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187736 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 2.875e-26 Identity = 58/114 (50.88%), Postives = 77/114 (67.54%), Query Frame = -1 Query: 239 LEGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAFRRDATEVNHEDFNEGIIQVQAK 580 L+GF S IKV+ TNR DILDPAL+R GR+DRKIEFP+P + R IL+IHSRKMN+ +N ++++ + +GA+LKAVC EAGM A R V+ EDF + +V K Sbjct: 277 LDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKK 390
BLAST of CN187736 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.875e-26 Identity = 60/114 (52.63%), Postives = 74/114 (64.91%), Query Frame = -1 Query: 239 LEGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAFRRDATEVNHEDFNEGIIQVQAK 580 L+GF + IKVI ATNR DILD AL+R GR+DRKIEFP P EEAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM A R V EDF + +V K Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
BLAST of CN187736 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 117.857 bits (294), Expect = 3.755e-26 Identity = 59/116 (50.86%), Postives = 76/116 (65.52%), Query Frame = -1 Query: 233 LEGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAFRRDATEVNHEDFNEGIIQVQAKKK 580 L+GF + IK+I ATNR DILDPAL+R GR+DRKIEFP P+ ARA IL+IHSRKMN+ +N ++A + +GA +K VC EAGM A R V EDF + +V K + Sbjct: 279 LDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVMNKNQ 394
BLAST of CN187736 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.904e-26 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = -1 Query: 230 LEGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAFRRDATEVNHEDFNEGIIQVQAKKKA 580 L+GF + +KVI ATNR + LDPAL+R GR+DRKIEFP P + + +I +IH+ KMN+ DVN EE S DD +GA +KA+C E+G+LA R V H DF + +V +K A Sbjct: 315 LDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKTA 431
BLAST of CN187736 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.365e-26 Identity = 55/119 (46.22%), Postives = 81/119 (68.07%), Query Frame = -1 Query: 224 LEGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAFRRDATEVNHEDFNEGIIQVQAKKKASL 580 ++GF ++++AATNR DILDPAL+R GR DR I+ P PT EAR +IL+IH+RKMN+ DV+ ++A TD+ +GA L A+ +EAGM A R + V+ DFN + +V ++ S+ Sbjct: 290 MDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDFNAAVAKVMGERNRSM 408
BLAST of CN187736 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.365e-26 Identity = 57/114 (50.00%), Postives = 74/114 (64.91%), Query Frame = -1 Query: 239 LEGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAFRRDATEVNHEDFNEGIIQVQAK 580 L+GF S IK+I ATNR DILDPAL+R GR+DRKIEFP+P E AR IL+IHSR+MN+ +N ++A +GA++KA C EAGM A R V ED + +V + Sbjct: 288 LDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKVMKR 401
BLAST of CN187736 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 8.365e-26 Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = -1 Query: 233 LEGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAFRRDATEVNHEDFNEGIIQVQAKKK 580 L+GF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ + RI IH+ +M + DVN EL + DD +GA +KA+C EAG++A R +V +EDF + V +KK Sbjct: 315 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK 430
BLAST of CN187736 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.093e-25 Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = -1 Query: 239 LEGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAFRRDATEVNHEDFNEGIIQVQAK 580 L+GF +KVI ATNR DILDPA++R GR DR IE P PT E R +I +IH+RKM + DV+F+ELAR T+ +GA +KA+C EAGM A R + +V DF + I +V K Sbjct: 272 LDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLKK 385
BLAST of CN187736 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.093e-25 Identity = 56/123 (45.53%), Postives = 85/123 (69.11%), Query Frame = -1 Query: 215 LEGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAFRRDATEVNHEDFNEGIIQV-QAKKKASLNYY 580 L+GF + ++K+I ATNR D+LDPAL+R GRLDRKIE P P E++R IL+IH+ + H ++++E + + + FNGA L+ +C EAGM A R + V HEDF + + ++ +AKK S ++Y Sbjct: 270 LDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
BLAST of CN187736 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.093e-25 Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = -1 Query: 233 LEGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAFRRDATEVNHEDFNEGIIQVQAKKK 580 ++GF + ++K+I ATNR D+LDPAL+R GRLDRKIE P P E R +L+IH+ + H DV++E +A+ D FN A L+ VC EAGM A R + V EDF + + + Q KK Sbjct: 268 MDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKK 383 The following BLAST results are available for this feature:
BLAST of CN187736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 252
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187736 ID=CN187736; Name=CN187736; organism=Citrus sinensis; type=EST; length=580bpback to top |