CX675503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675503 vs. ExPASy Swiss-Prot
Match: FUMC_PROMM (Fumarate hydratase class II OS=Prochlorococcus marinus (strain MIT 9313) GN=fumC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.192e-27 Identity = 59/123 (47.97%), Postives = 85/123 (69.11%), Query Frame = -1 Query: 441 CAQVIGNHVPITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 809 C QVIG +T+ G +GH ++NV+KP+I LLHS+ LL DA + V+GI+ NR +I L +SLMLVT+L P+IGYD A+ +A AH++G +L++AALKLG ++ E+FD +V P M Sbjct: 339 CLQVIGLDSAVTMAGGSGHLQMNVYKPLIGFNLLHSIELLHDACRKYRLAMVQGIEPNRIKIQHDLEQSLMLVTALAPEIGYDKASEIAHLAHEKGFSLREAALKLGYVSKEDFDRIVNPALM 461
BLAST of CX675503 vs. ExPASy Swiss-Prot
Match: FUMC_CHLCV (Fumarate hydratase class II OS=Chlamydophila caviae GN=fumC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.397e-26 Identity = 58/125 (46.40%), Postives = 83/125 (66.40%), Query Frame = -1 Query: 435 CAQVIGNHVPITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 809 CAQVIGN+ + +GGS G+FELNV KP+I L S+ +L +F V G++ N+ R+ + L SLMLVT+L P +GYD + +A KA + LK+A +++G L++EEFD LVVPE M+G Sbjct: 334 CAQVIGNNQAVIMGGSRGNFELNVMKPVIIYNFLQSVDILAGGMQAFADYFVSGLRVNKPRLKEYLDNSLMLVTALTPVLGYDKCSKMALKAFHDNINLKEACIQMGYLSAEEFDRLVVPESMVG 458
BLAST of CX675503 vs. ExPASy Swiss-Prot
Match: FUMC_LISIN (Fumarate hydratase class II OS=Listeria innocua GN=fumC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.113e-26 Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = -1 Query: 441 AQVIGNHVPITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 806 AQV+GN I + S G+FELNV+KP+I L S+ LL D+ SF +C+ G+ AN I +++SLMLVT+LNP IGY+ AA +AK A E TTLK+AA+K G + +EFD + P KM Sbjct: 331 AQVMGNDTTINIAASQGNFELNVYKPVIIFNFLESITLLSDSMRSFRIHCLEGLTANESVIEAKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKEFDLWIDPLKM 452
BLAST of CX675503 vs. ExPASy Swiss-Prot
Match: FUMC_BLOFL (Fumarate hydratase class II OS=Blochmannia floridanus GN=fumC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.310e-26 Identity = 57/126 (45.24%), Postives = 87/126 (69.05%), Query Frame = -1 Query: 432 CAQVIGNHVPITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 809 C QV+GN + I++GGS+G +LN ++P+I L S+RLL D+ +F C+ GI+ +RI KLL++SLMLVT+L+ IGYD +A +A+ A+ G TLK A+++ G + ++FD+ V PE MI P Sbjct: 321 CCQVMGNDLSISLGGSSGQLQLNTYRPLIIYNFLQSIRLLTDSIKNFHDYCIVGIRPKFKRIEKLLNKSLMLVTALSSHIGYDKSAQIAQTAYLNGITLKAASIQSGYVTEKQFDDWVCPENMIYP 446
BLAST of CX675503 vs. ExPASy Swiss-Prot
Match: FUMC_PROMA (Fumarate hydratase class II OS=Prochlorococcus marinus GN=fumC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.889e-23 Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = -1 Query: 435 CAQVIGNHVPITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 809 C Q++ +T+ GS GH ++N +KP+IA LL S+ LL A S + GI+ N E+I L SLML+TSL P IGY+ A+ +A+ AH++ TLK+A LG LN ++FD +V P+ M G Sbjct: 338 CTQIMALDSAVTMAGSGGHLQMNSYKPLIAFNLLESIDLLSSACKSSRILMIEGIEPNLEKIQNSLQNSLMLITSLTPIIGYEKASKIAQCAHEKDITLKEATKLLGYLNEDDFDRIVNPQSMTG 462
BLAST of CX675503 vs. ExPASy Swiss-Prot
Match: FUMC_CHLMU (Fumarate hydratase class II OS=Chlamydia muridarum GN=fumC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.889e-23 Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = -1 Query: 435 CAQVIGNHVPITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 809 C+QVIGN+ + G+ G+FELNV KP+I L S+ LL A SF V G++ NR ++ + + SLMLVT+L P +GYD + +A KA E +LK+A + LG L+ +EFD VVP M+G Sbjct: 334 CSQVIGNNQSVIFSGTKGNFELNVMKPVIIYDFLQSVNLLSGAMRSFADYFVSGLKVNRGQLQQNVERSLMLVTALAPVLGYDKCSKIALKAFHENLSLKEACVSLGFLSEQEFDTHVVPGLMLG 458
BLAST of CX675503 vs. ExPASy Swiss-Prot
Match: FUMC_CHLTR (Fumarate hydratase class II OS=Chlamydia trachomatis GN=fumC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.177e-23 Identity = 55/125 (44.00%), Postives = 79/125 (63.20%), Query Frame = -1 Query: 435 CAQVIGNHVPITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 809 C+QVIGN+ I G+ G+FELNV KP+I L S+ LL A SF V G++ N+ ++ + + SLMLVT+L P +GYD + +A KA E +LK+A + LG L+ +EFD V+P M+G Sbjct: 334 CSQVIGNNQSIIFSGTKGNFELNVMKPVIIYDFLQSVNLLAGAMRSFADYFVCGLKVNKGQLQQNVERSLMLVTALAPVLGYDKCSKIALKAFHENLSLKEACVSLGFLSEKEFDEHVIPGLMVG 458
BLAST of CX675503 vs. ExPASy Swiss-Prot
Match: FUMC2_BRAJA (Fumarate hydratase class II 2 OS=Bradyrhizobium japonicum GN=fumC2 PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 7.177e-23 Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = -1 Query: 432 QVIGNHVPITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 803 QV+ N V + GG+ G+ E+NV+KP+I + S+ +L D +F V G + NR++I + + SLMLVT+L P IGYD A+ +A A TLK AALKLG + EFD +V P KM+ P Sbjct: 339 QVMANDVAVGFGGAGGYLEMNVYKPLIIHNIAQSVTILTDGCTNFRTFLVEGTEPNRKKIKEYVERSLMLVTALAPVIGYDKASRIAHYAMDNDLTLKSAALKLGFVTEPEFDRIVDPAKMVKP 462
BLAST of CX675503 vs. ExPASy Swiss-Prot
Match: FUMC_PROMP (Fumarate hydratase class II OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=fumC PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.143e-21 Identity = 51/124 (41.13%), Postives = 76/124 (61.29%), Query Frame = -1 Query: 438 CAQVIGNHVPITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 809 C QV+G +++ ++G ++N +KP+I +L S++LL A ++F V GIQ N + I L SLMLVT+L PKIGY+ AA +A A E LK+A +KLG L + EF++ + KMI Sbjct: 338 CTQVMGFEYAVSIANASGTLQMNEYKPLIGFNILTSIKLLNHAISNFRLKLVEGIQPNPKTIKANLENSLMLVTALVPKIGYEKAAEIANLAFNESINLKEATIKLGYLTANEFEDAINTNKMI 461
BLAST of CX675503 vs. ExPASy Swiss-Prot
Match: FUMC1_PSEAE (Fumarate hydratase class II 1 OS=Pseudomonas aeruginosa GN=fumC1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.954e-20 Identity = 51/122 (41.80%), Postives = 77/122 (63.11%), Query Frame = -1 Query: 441 AQVIGNHVPITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 806 AQVIGN I V G +G+FELNV P++A LLHS++LL + S + + N+ ++S+ L + +LVT+LNP IGY AA +AK+A++EG + D AL+ L+ + L+ PEK+ Sbjct: 332 AQVIGNDAAIAVAGQSGNFELNVMLPLVADNLLHSIQLLANVSRLLADKAIASFKVNQGKLSEALARNPILVTALNPIIGYQKAAEIAKQAYREGRPIIDVALENTDLDRARLEVLLDPEKL 453 The following BLAST results are available for this feature:
BLAST of CX675503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675503 ID=CX675503; Name=CX675503; organism=Citrus sinensis; type=EST; length=809bpback to top |