CN187734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.324e-21 Identity = 75/256 (29.30%), Postives = 115/256 (44.92%), Query Frame = 3 Query: 27 YKAAAILKGFEEQKMAQIGSSLLVPCVQELVKNPALVVPDRYIRP----DQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXA--KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEG-FGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 773 + A+ LK F+E K V+ LV + VP + P PL SD + IP ID+ A ++ A +WGFFQ++NHG+S LEK+KK V F S E +K+++ + F + +W D FS P KP LP R+ + YS ++ +L + L + E L ++ + + + M +YYPPCP+P+ +G S HSD + LT+LL Sbjct: 10 FDRASELKAFDETKTG----------VKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAP-DTPKPQ---DLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLL 251
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.403e-20 Identity = 63/223 (28.25%), Postives = 105/223 (47.09%), Query Frame = 3 Query: 138 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAK--LDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLP---VHLR--KPHLFPKLPPSLRETLEVY---SMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776 +P +++ PD + P S D Q+P+ID+ A + A + GFF + NHG+ + L + ++ FF EK+K + G+ G+ +FV KL W + S P +H + K + K+ + +VY + + +L+ ++ +G L ++ +EFFE+ R+NYYP C QPE +G PH D +LTIL Q Sbjct: 37 IPQQFVWPDHEKP--STDVQPLQVPLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKAQRKWGESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQ 257
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.403e-20 Identity = 65/220 (29.55%), Postives = 97/220 (44.09%), Query Frame = 3 Query: 138 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSM-----LTLPV--HLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776 +P+ ++ P+ D+ S L + + + A++ AC GFFQ+ HG+ A FF L + EK++ + PG + G+ A KL W + S PV L P P R + Y E+K L+ ++ + L ++ REFF + MR NYYPPCP+PE+ +G PH D ALTILLQ Sbjct: 42 IPEPFVWPNGDARPASAAELDMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGR-VYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ 260
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.403e-20 Identity = 65/220 (29.55%), Postives = 97/220 (44.09%), Query Frame = 3 Query: 138 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSM-----LTLPV--HLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776 +P+ ++ P+ D+ S L + + + A++ AC GFFQ+ HG+ A FF L + EK++ + PG + G+ A KL W + S PV L P P R + Y E+K L+ ++ + L ++ REFF + MR NYYPPCP+PE+ +G PH D ALTILLQ Sbjct: 42 IPEPFVWPNGDARPASAAELDMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGR-VYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ 260
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.139e-20 Identity = 57/173 (32.95%), Postives = 93/173 (53.76%), Query Frame = 3 Query: 267 KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQ---AMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776 K++ AC+ WGFF+LVNHGMST L+ ++K + + +ME++ K + G V SE LDW F + LP P L R+T++ +++EL+ LAE L+ + E L ++ +++ F +++ YPPCP+P+ + GL HSDA + +L Q Sbjct: 23 KINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEM-----VAAKGLDDVQSEIHDLDWESTFFLRHLP--SSNISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQ 188
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.558e-19 Identity = 63/221 (28.51%), Postives = 110/221 (49.77%), Query Frame = 3 Query: 138 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVH-LRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFEN----GVQA-MRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLN 782 +PD Y +D L S +P+ID+ + AC WG FQ+ NHG+ + L+ ++ F L ++ K K + + G+G A + S K W++ F+++ P+H RK L+P E +E Y ++ LA L+ L +++++++ N G QA +++N+YP CP+P++ MGL+ H+D+ +TIL Q N Sbjct: 27 LPDSYTWTPKDDLLFSASASDETLPLIDLSDIHVATL-------VGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSPLHDFRK--LWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNN 238
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.035e-19 Identity = 59/196 (30.10%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 198 ISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQ---AMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776 ++ PV+DM K++ AC+ WGFF+LVNHG+ST L+ ++K + + +ME++ K +E V SE LDW F + LP P L R+T++ +++EL+ LAE L+ + E L ++ +++ F +++ YPPCP+P+ + GL H+DA + +L Q Sbjct: 1 MATFPVVDMDLINGEERAATLE-KINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFKEMVAAKGLEA-----VQSEIHYLDWESTFFLRHLP--SSNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 188
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.010e-18 Identity = 71/249 (28.51%), Postives = 117/249 (46.99%), Query Frame = 3 Query: 87 SLLVPCVQELVKNPALV-----VPDRYIRPDQDSP-LISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRK------PHLFPKLPPS----LRETLEVYSMELKSLAENLISKMGEVLNIKDEE---MREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776 S++V QE+V + A++ +P ++I P ++SP ++ + L ++ +ID+ + AC+ GFF +VNHG+ A LE+ + ++ FF L + EK++ + G+ G+ +F KL W + S + +L KL L E Y E+ L+ L+ +GE L I + R FF+ MR+NYYP C +P +G PH D +LTIL Q Sbjct: 2 SMVVQQEQEVVFDAAVLSGQTEIPSQFIWPAEESPGSVAVEEL--EVALIDVGAGAERSSVVRQVGE---ACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQ 245
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18 Identity = 70/262 (26.72%), Postives = 111/262 (42.37%), Query Frame = 3 Query: 3 DSVLFQNQYKAAAILKGFEEQKMAQIGSSLLVPCVQELVKNPALVVPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXA-KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQA---FVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776 +S + Y + LK F++ K V+ LV + VP ++ P +D + + PVID+Q K+ A ++WGFFQ+VNHG+ T+ L++ + FF E KK+Y+ + + S W D P P + P E+L +S ++K L L+ + E L + ++++ + NYYPPCPQPE MG H+D +TILLQ Sbjct: 2 ESPRVEESYDKMSELKAFDDTKAG----------VKGLVDSGITKVPQIFVLPPKDRAKKCETHFV--FPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAP----NPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQ 247
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.938e-18 Identity = 58/194 (29.90%), Postives = 98/194 (50.52%), Query Frame = 3 Query: 210 PVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF---ENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLN 782 PVIDM+ K+ AC+ WGFF+LVNHG+S ++ +++ + +N ME++ K +E V SE LDW F + LPV P L R+ ++ ++ +L+ LAE L+ + E + ++ +++ F + +++ YPPCP+PE + GL H+DA + +L Q N Sbjct: 5 PVIDMEKLNGEERAPTME-KIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATKGLEA-----VQSEINDLDWESTFFLRHLPV--SNISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDN 190 The following BLAST results are available for this feature:
BLAST of CN187734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187734 ID=CN187734; Name=CN187734; organism=Citrus sinensis; type=EST; length=783bpback to top |