CN187734

Overview
NameCN187734
Unique NameCN187734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.361e-14
Identity = 47/171 (27.49%), Postives = 85/171 (49.71%), Query Frame = 3
Query:  279 ACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAM-----RMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776
            AC+ WGFF+LVNH +    ++++++  +  +   ME++ K       +EG      V +   +DW   F +  LPV        P L    R+ ++ ++ +L+ LAE ++  + E L ++   ++  F      +     +++ YPPCP+PE   GL  H+DA  L +L Q
Sbjct:   27 ACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFKELM-ASKVEG-----AVVDANDMDWESTFFIRHLPVSNLSE--IPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQ 189          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.390e-14
Identity = 52/199 (26.13%), Postives = 94/199 (47.24%), Query Frame = 3
Query:  198 ISQIPVIDMQXXXXXXXXXXXXA--KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDM-EGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF--ENG-VQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776
            I   P+IDM+               ++  AC  WGFFQ+VNH +S   ++K+++  +  +    E+K K      DM +  G     S+   +DW   F +   P         P L    R+ ++ ++ +++ L+E L+  + E L ++   ++  F   NG     +++ YPPCP+P+ + GL  H+DA  + +L Q
Sbjct:    4 IVNFPIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQKFK------DMVQTKGLVSAESQVNDIDWESTFYLRHRPT--SNISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 194          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.179e-13
Identity = 52/176 (29.55%), Postives = 84/176 (47.73%), Query Frame = 3
Query:  267 KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKL------DWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776
            K+  A +++GFFQ+VNHG+    ++K+   V  F     + K++Y+      + F + F+ S    L      +W D    + +  +   P  FP +    R+ L  YS  +++L   L   + E L +K   + E        +  +YYP CPQPE   G S HSD+  LTIL+Q
Sbjct:  112 KIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSR----DRFNKNFLYSSNYVLIPGIACNWRDTMECI-MNSNQPDPQEFPDV---CRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQ 279          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13
Identity = 47/169 (27.81%), Postives = 82/169 (48.52%), Query Frame = 3
Query:  279 ACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW---QHPGDMEGFGQAFVVSEEQKLDWADLFSMLT-LPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 773
            A KE GFFQ+VNHG+S   +  ++   E FF+L   +K   +   +H  +    G  +    E+   W D   +    PV     + +P  P  LR+ +E ++ + + + + L+  + E + I+ +        G   + +N+YP CP P+K +G  PH D   +T+LL
Sbjct:   54 AGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGEKY--WRDCLRLACPFPVD-DSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLL 219          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13
Identity = 66/257 (25.68%), Postives = 106/257 (41.25%), Query Frame = 3
Query:   27 YKAAAILKGFEEQKMAQIGSSLLVPCVQELVKNPALVVPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXX-AKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDME-GFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPK---LPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLN 782
            Y  A+ LK F+E K+           V+ LV      VP  +  P  +       + +  IP ID+              AK+  A +++GFFQ +NHG+    +EK+   +  F +   E +K ++      +  +     + E     W D  S +  P         PK   LP    E +  YS E+  LAE +   + E L +    ++E        M  + +PPCP+P +  G + H+D + LTILL  N
Sbjct:    5 YDRASELKAFDEMKIG----------VKGLVDAGVTKVPRIFHNPHVNVANPKPTSTVVMIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAPD-------VPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDN 244          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.716e-13
Identity = 56/207 (27.05%), Postives = 95/207 (45.89%), Query Frame = 3
Query:  201 SQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKL---PPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF---ENGVQAMRMNYYPPCPQPEK-------VMGLSPHSDAAALTILLQLN 782
            S IPVIDM               L  AC+++GFF+++NHG+S   +  L+ E   FF+L   EK +   +P    G+G +  +     + W + + ++          LFP L   P + R  LE Y+  ++ +  +++ K+ + L IK           +N    +R+N+YPPCP   K       V+G   H+D   +++L   N
Sbjct:   16 SLIPVIDMSDPESKHA-------LVKACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEKTQVAGYP---FGYGNS-KIGRNGDVGWVE-YLLMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNN 210          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.854e-13
Identity = 44/169 (26.04%), Postives = 83/169 (49.11%), Query Frame = 3
Query:  279 ACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF---ENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776
            AC+ WGFF+LVNHG+    ++ +++  +  +   ME++ K       +EG     + +E   +DW   + +  LP         P L    R  ++ ++  L+ LAE L+  + E L ++   +++ F   +      ++  YPPCP+ + + GL  H+DA  + +L Q
Sbjct:   27 ACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEG-----IQAEVTDMDWESTYFLRHLP--QSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQ 188          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12
Identity = 50/182 (27.47%), Postives = 88/182 (48.35%), Query Frame = 3
Query:  264 AKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDM--EGFGQAFVVSEEQ----KLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAM-----RMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776
            A L  AC+ WGFF+L+NHG+S    E+ +        ++ E  +++++   +   + F    + S E      LDW   F +  LP         P L      T++ +++ L+ LAE L+  + E L ++   ++  F  G   +     +++ YPPCP+PE + GL  H+DA  + +L Q
Sbjct:   14 AVLRDACENWGFFELLNHGISHEPNEQSE-------TVNKEHYREHYRRFREQRFKEFAAKTLDSGENVDGDNLDWESTFFLRHLPTS--NISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQ 186          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.366e-12
Identity = 53/215 (24.65%), Postives = 94/215 (43.72%), Query Frame = 3
Query:  153 IRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLP--VHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF---ENGVQAMRMNYYPPCPQPE----KVMGLSPHSDAAALTIL 770
            ++P + +PL +       IPV+D+                  AC+++GFF+LVNHG+    +  L+ E   FF  S  EK +    P D  G+G    +     + W +   + T P  +  +   +F + P   R  +E Y   +K++   ++  M E L I+           E      R+N+YPPCP+ +     ++G   H+D   +++L
Sbjct:   15 LKPFKSTPLFTG------IPVVDLTHPDAKNLIVN-------ACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDR--AGPPDPFGYGSK-RIGPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVL 213          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11
Identity = 47/179 (26.26%), Postives = 87/179 (48.60%), Query Frame = 3
Query:  279 ACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPH---LFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEE-----MREFFENGVQAMRMNYYPPCPQPEKVM---GLSPHSDAAALTILLQLN 782
            AC+E+GFF++VNHG+    + +L++E  GFF L    K +    P +  G+G    +     + W + + +L     L  P    +F + P   RE++E Y  E+K ++  ++  + E L I+  +     +R+  E     +R+N+YP   +  + M   G   H+D   +++L   N
Sbjct:   48 ACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLPQSLKNR--AGPPEPYGYGNK-RIGPNGDVGWIE-YLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRD--EKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNN 220          
The following BLAST results are available for this feature:
BLAST of CN187734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ACCO_PERAE3.361e-1427.491-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_DIACA4.390e-1426.13Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
DV4H_CATRO2.179e-1329.55Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
IDS3_HORVU2.846e-1327.812'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
GSL_ARATH2.846e-1325.68Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
G2OX1_ARATH3.716e-1327.05Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
ACCO_DIOKA4.854e-1326.041-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO_DENCR3.146e-1227.471-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
G2OX_PHACN5.366e-1224.65Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
G2OX2_ARATH4.543e-1126.26Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004O19_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004O19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187734 ID=CN187734; Name=CN187734; organism=Citrus sinensis; type=EST; length=783bp
ATGACTCAGTCTTGTTCCAAAATCAATACAAAGCTGCAGCAATCTTGAAA
GGATTTGAGGAACAAAAGATGGCCCAGATTGGAAGTTCTCTCCTTGTGCC
TTGTGTTCAAGAGTTGGTCAAGAATCCTGCGTTAGTTGTCCCCGACAGAT
ACATACGTCCAGATCAAGATTCACCACTCATTTCTGATGATACTTTGATT
TCACAGATACCAGTTATTGACATGCAAAGCTTACTTTCTGAAGAATCAAT
GGATTCTGAGCTAGCCAAGCTCGACTTCGCATGCAAAGAATGGGGTTTTT
TCCAGCTGGTAAATCATGGAATGAGCACAGCATTTCTAGAGAAATTAAAG
AAAGAGGTTGAGGGATTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATA
TTGGCAGCATCCAGGAGATATGGAAGGCTTTGGACAAGCCTTTGTTGTAT
CTGAGGAACAAAAGCTTGATTGGGCTGACCTTTTCTCCATGCTGACTCTT
CCAGTTCATCTGAGGAAGCCACACTTATTTCCTAAGCTCCCTCCTTCCCT
CAGAGAGACCTTGGAAGTTTACTCAATGGAATTAAAATCCCTAGCCGAGA
ACCTAATATCGAAAATGGGAGAAGTGTTAAATATCAAAGATGAAGAAATG
AGAGAATTCTTTGAAAATGGAGTGCAAGCAATGAGGATGAATTATTACCC
TCCATGTCCTCAGCCCGAGAAGGTTATGGGCCTGTCGCCACATTCTGATG
CAGCTGCACTTACCATTCTGCTACAACTTAATG
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