CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_MAIZE (Superoxide dismutase [Mn] 3.2, mitochondrial OS=Zea mays GN=SODA.1 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.009e-47 Identity = 93/147 (63.27%), Postives = 109/147 (74.15%), Query Frame = 1 Query: 37 MALRSLATRKAI-----GLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 MALR+LA++ A+ G + RG+ TV LPDL YD+ ALEP ISGEIM+LHHQKHH YV NYNKA+EQL + K D S VVQLQGAIKFNGGGH NHSIFW+NL P+ E GGEPPH LGWAID FGS EAL+++M+A Sbjct: 1 MALRTLASKNALSFALGGAARPSAASARGVTTVALPDLSYDFGALEPVISGEIMRLHHQKHHATYVVNYNKALEQLDAVVVKGDASAVVQLQGAIKFNGGGHFNHSIFWENLKPISE-GGEPPHGKLGWAIDEDFGSFEALVKRMNA 146
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_DICDI (Superoxide dismutase [Mn], mitochondrial OS=Dictyostelium discoideum GN=sod2 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.512e-35 Identity = 80/144 (55.56%), Postives = 97/144 (67.36%), Query Frame = 1 Query: 37 MALRSLATRKAIGLGKSVGLGLRGLQT--VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 M RSL K +G +S GL G Q+ TLPDLPYDY AL P IS EIM LHH+KHHQ YV N N A+++L A + D + ++ LQ AIKFNGGGHVNHSIFW NLAP ++ GG P L AI+ +GS+E LI+KMSA Sbjct: 1 MLPRSLKLIKKVG--ESNGLRNFGSQSNSYTLPDLPYDYGALSPVISPEIMTLHHKKHHQTYVNNLNIALDKLSSASSAKDVAQMIALQSAIKFNGGGHVNHSIFWTNLAPKNQDGGVAPSGPLADAINKQYGSIEKLIEKMSA 142
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_CHAFE (Superoxide dismutase [Mn], mitochondrial OS=Charybdis feriatus PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.552e-32 Identity = 71/127 (55.91%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 82 KSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 +S+ GL Q TLPDLPYDY ALEP IS EIMQLHH KHHQ YV N N A E+L +A K D ST++ L A++FNGGGH+NHSIFW+NL+ GGEP L AI+ FGS+E + ++SA Sbjct: 10 RSLRAGLWCRQKHTLPDLPYDYGALEPTISAEIMQLHHSKHHQTYVNNLNVAEEKLAEAKEKGDVSTIISLAPALRFNGGGHINHSIFWQNLS---ADGGEPEGELLA-AINRDFGSVENMKNQLSA 132
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MOUSE (Superoxide dismutase [Mn], mitochondrial OS=Mus musculus GN=Sod2 PE=1 SV=3) HSP 1 Score: 131.339 bits (329), Expect = 1.912e-30 Identity = 66/114 (57.89%), Postives = 80/114 (70.18%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D +T V LQ A+KFNGGGH+NH+IFW NL+P +GGGEP L AI FGS E +K++A Sbjct: 27 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNATEEKYHEALAKGDVTTQVALQPALKFNGGGHINHTIFWTNLSP--KGGGEPKGELLE-AIKRDFGSFEKFKEKLTA 137
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MACFA (Superoxide dismutase [Mn], mitochondrial OS=Macaca fascicularis GN=SOD2 PE=2 SV=3) HSP 1 Score: 130.954 bits (328), Expect = 2.498e-30 Identity = 71/140 (50.71%), Postives = 88/140 (62.86%), Query Frame = 1 Query: 52 LATRKAIGLGKSVGLGLRGL---QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 + +R G G+ + L L Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS E +K++A Sbjct: 1 MLSRAVCGTGRQLAPALGYLGSRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTA 137
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_RAT (Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus GN=Sod2 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 3.262e-30 Identity = 66/114 (57.89%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 +LPDLPYDY ALEP I+ +IMQLHH KHH YV N N E+ +AL K D +T V LQ A+KFNGGGH+NHSIFW NL+P +GGGEP L AI FGS E +K++A Sbjct: 27 SLPDLPYDYGALEPHINAQIMQLHHSKHHATYVNNLNVTEEKYHEALAKGDVTTQVALQPALKFNGGGHINHSIFWTNLSP--KGGGEPKGELLE-AIKRDFGSFEKFKEKLTA 137
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MACNE (Superoxide dismutase [Mn], mitochondrial OS=Macaca nemestrina GN=SOD2 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.262e-30 Identity = 71/140 (50.71%), Postives = 88/140 (62.86%), Query Frame = 1 Query: 52 LATRKAIGLGKSVGLGLRGL---QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 + +R G G+ + L L Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS E +K++A Sbjct: 1 MLSRAVCGTGRQLAPALGYLGSRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKYKEKLTA 137
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_CHLPN (Superoxide dismutase [Mn] OS=Chlamydia pneumoniae GN=sodA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.260e-30 Identity = 55/112 (49.11%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKM 456 +LP+LPYDY ALEP IS EIM LHHQKHHQ Y+ N N A+++L A + + + ++ L+ A++FNGGGH+NHS+FW+ LAP+ +GGG+PP L I+ +G+++ ++K+ Sbjct: 7 SLPELPYDYDALEPVISSEIMILHHQKHHQIYINNLNAALKRLDAAETQQNLNELIALEPALRFNGGGHINHSLFWETLAPIDQGGGQPPKHELLSLIERFWGTMDNFLKKL 118
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_CAVPO (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Cavia porcellus GN=SOD2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.260e-30 Identity = 69/124 (55.65%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 94 LGLRGL-QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 LG+ G+ Q +LPDLPYDY AL+P I+ EIMQLHH KHH AY+ N N A E+ +AL K D + V LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + +K++A Sbjct: 17 LGILGVRQKHSLPDLPYDYGALQPHINAEIMQLHHSKHHAAYLNNLNIAEEKYQEALAKGDVTAQVALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTA 137
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_BOVIN (Superoxide dismutase [Mn], mitochondrial OS=Bos taurus GN=SOD2 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 9.491e-30 Identity = 66/117 (56.41%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 112 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N A E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGE P L AI FGS +K++A Sbjct: 24 QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVAEEKYREALEKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGE-PQGELLEAIKRDFGSFAKFKEKLTA 137 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |