CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRP3 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M3 GN=sodA PE=3 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 9.214e-17 Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 118 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 + LP+LPY Y ALEP E M LHH KHH YV N N A+E+ L + L V T ++ A+ NGGGH+NH++FW+ L+P + S + AID FGS +A ++ +A Sbjct: 3 IILPELPYAYDALEPQFDAETMTLHHDKHHATYVANTNAALEKHPEIGENLEELLADV-TKIPEDIRQALINNGGGHLNHALFWELLSPEK----QDVTSDVAQAIDDAFGSFDAFKEQFTA 119
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_HALMA (Superoxide dismutase [Mn] OS=Haloarcula marismortui GN=sod PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 9.214e-17 Identity = 45/105 (42.86%), Postives = 57/105 (54.29%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 LP LPYDY ALEP IS +++ HH HHQ YV A E L + + D + G + NG GH H++FW+N+ P GGGEP L I+ FGS E Sbjct: 9 LPPLPYDYDALEPHISEQVLTWHHDTHHQGYVNGLESAEETLAENRDAGDFGSSAAAMGNVTHNGCGHYLHTLFWENMDP--NGGGEPEGELLD-RIEEDFGSYE 110
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM3_PLEBO (Superoxide dismutase [Mn] 3 (Fragment) OS=Plectonema boryanum GN=sodA3 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 9.214e-17 Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA-----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEA 441 LP LPYD AL AI E M++HH +HHQ YV N N A +E + + LN V + ++ I+ N GGH+NH+IFW+ ++P +GGG+P ++ AI+ FG+ E+ Sbjct: 35 LPPLPYDAGALSKAIDAETMRIHHDRHHQTYVDNLNTALKDQPNLQNLSIEAMLRDLNAVPEN----IRNTIRNNAGGHLNHTIFWQIMSP--DGGGQPT-GAIAQAINQTFGNFES 144
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_PASHA (Superoxide dismutase [Mn] OS=Pasteurella haemolytica GN=sodA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.203e-16 Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG-------AIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEA 441 TLP+L Y Y ALEP + M++HH KHHQAY+ N N A+E + L K + + L A++ N GGHVNH++FWK L G +L AI+ FGS+EA Sbjct: 4 TLPELGYAYDALEPHFDAKTMEIHHSKHHQAYINNANAALEAHPELLEKCPGALIKDLSQVPAEKRIAVRNNVGGHVNHTLFWKGLKT-----GTTLQGALKEAIERDFGSVEA 112
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.572e-16 Identity = 49/121 (40.50%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQ----ALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 TLP+LPY +ALEP M+LHH KHHQ YV N N A+E+ + +L ++ D S + + ++ A++ NGGGH+NHS FW L P +G +G AI FGS E + A Sbjct: 4 TLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKA 124
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.572e-16 Identity = 49/121 (40.50%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQ----ALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 TLP+LPY +ALEP M+LHH KHHQ YV N N A+E+ + +L ++ D S + + ++ A++ NGGGH+NHS FW L P +G +G AI FGS E + A Sbjct: 4 TLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKA 124
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRP8 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M18 GN=sodA PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.681e-16 Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 118 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 + LP+LPY Y ALEP E M LHH KHH YV N N A+E+ L + L V T ++ A+ NGGGH+NH++FW+ L+P + + AID FGS +A ++ +A Sbjct: 3 IILPELPYAYDALEPQFDAETMSLHHDKHHATYVANTNAALEKHPEIGENLEELLADV-TKIPEDIRQALINNGGGHLNHALFWELLSPEK----QDVTPDVAQAIDDAFGSFDAFKEQFTA 119
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.681e-16 Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV-------EQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 LP LPY +ALEP I M +HH KHH YVT N A+ E+ +AL + ++ A++ NGGGH NH++FW+ L+P GG P L AI+ FGS + +K + Sbjct: 5 LPKLPYPANALEPHIDEATMNIHHGKHHNTYVTKLNAALEGHSALAEKSIEALVSDLDAVPENIRTAVRNNGGGHANHTLFWQILSP---NGGGAPTGELADAINAEFGSFDQFKEKFA 120
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_ACIAM (Superoxide dismutase [Fe] OS=Acidianus ambivalens GN=sod PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.681e-16 Identity = 44/113 (38.94%), Postives = 67/113 (59.29%), Query Frame = 1 Query: 109 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 L+ LP LPY+ ALEP IS EI+ +H+ HH+ YV N V+++ + L +S +QG ++ FN GH HS++W+N+AP +GGG+ P +G I+ +GS E Sbjct: 7 LKKYELPPLPYNLDALEPYISKEIIDVHYNGHHRGYVNGANSFVDRVNKILKGEISSGQYDIQGLLRGLVFNINGHKLHSLYWQNMAPAGKGGGK-PGGVIGDLIEKQYGSFE 118
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.501e-16 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE-------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGG 381 LP+LPY++ ALEP I E M++HH KHH YVT N A+E + + + +D S +Q A++ NGGGH+NHS+FW+ L P E G Sbjct: 5 LPNLPYEFDALEPYIDKETMEIHHDKHHNTYVTKLNAAIEGTDLENKSIEEIVANLD-SVPSDIQTAVRNNGGGHLNHSLFWQLLTPNSEEKG 96 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |