CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.501e-16 Identity = 46/119 (38.66%), Postives = 66/119 (55.46%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL--FQALNKVDTSTVV-----QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 L LPY Y ALEP I MQLHH KHH AYV N N A+E+ Q+++ D T + ++ ++ N GGHVNH++FW+ + G P ++ AI+ FGS +A Q+ + Sbjct: 5 LKPLPYAYDALEPYIDATTMQLHHDKHHAAYVNNLNAAIEKYSDLQSMSVEDLVTHLDRVPEDVRTTVRNNAGGHVNHTMFWEIMG---ANGSGAPTGAISEAINNSFGSFDAFKQQFN 120
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRP6 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M6 GN=sodA PE=3 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 4.573e-16 Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 118 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 + LP+LPY Y ALEP E M LHH KHH YV N N A+E+ L + L V T ++ A+ NGGGH+NH++FW+ L+P + + AID FGS +A ++ +A Sbjct: 3 IILPELPYAYDALEPQFDAETMTLHHDKHHATYVANANAALEKHPEIGENLEELLADV-TKIPEDIRQALINNGGGHLNHALFWELLSPEK----QDITPDVAQAIDDAFGSFDAFKEQFTA 119
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STAEP (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis GN=sodA PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 4.573e-16 Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGE 384 LP LPY + ALEP I E M++HH KHH YVT N K++E++ L+ V + +Q A++ NGGGH+NHS+FW+ L P E GE Sbjct: 5 LPKLPYAFDALEPHIDKETMEIHHDKHHNTYVTKLNAVVEGTDLEAKSIEEIVANLDSVPS----DIQTAVRNNGGGHLNHSLFWELLTPNSEEKGE 97
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_BACAN (Superoxide dismutase [Mn] 2 OS=Bacillus anthracis GN=sodA2 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 4.573e-16 Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 109 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQ-------GAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 + + LP L YDY LEP I + +HH KHH YV N N A+E + NK + L+ A++ NGGGH HS+FW+ ++P GGGE P+ + ID +F + + L ++S Sbjct: 1 MSSFQLPKLSYDYDELEPYIDSNTLSIHHGKHHATYVNNLNAALENYSELHNKSLEELLCNLETLPKEIVTAVRNNGGGHYCHSLFWEVMSP--RGGGE-PNGDVAKVIDYYFNTFDNLKDQLS 121
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_BUCAI (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=sodA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.972e-16 Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNK----------AVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 LP LPY Y+ALEP E M++HH KHHQ Y+ N N +E+L LN++ +++ + A++ N GGH+NHS FWK+L G + L I+ FG+++ +K + Sbjct: 5 LPSLPYSYNALEPFFDEETMKIHHTKHHQNYINNTNSILENTTFSSLPIEELISILNEI----ILEKKNALRNNAGGHINHSFFWKSLK-----SGTVLTNDLKIEIEKQFGTIDEFKEKFES 118
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 7.800e-16 Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 LP+LPY + ALEP I + M++HH KHH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L P E G ++ I +GSL+A ++ + Sbjct: 5 LPNLPYGFDALEPHIDKQTMEIHHDKHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKG-----TVVDKIKEQWGSLDAFKEEFA 117
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_SHIFL (Superoxide dismutase [Mn] OS=Shigella flexneri GN=sodA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 7.800e-16 Identity = 45/113 (39.82%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 TLP LPY Y ALEP + M++HH KHHQ YV N N A+E L + N + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVD 111
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_ECOLI (Superoxide dismutase [Mn] OS=Escherichia coli (strain K12) GN=sodA PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 7.800e-16 Identity = 45/113 (39.82%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 TLP LPY Y ALEP + M++HH KHHQ YV N N A+E L + N + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVD 111
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_ECO57 (Superoxide dismutase [Mn] OS=Escherichia coli O157:H7 GN=sodA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 7.800e-16 Identity = 45/113 (39.82%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 TLP LPY Y ALEP + M++HH KHHQ YV N N A+E L + N + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVD 111
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 7.800e-16 Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 46 RSLATRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQ-------GAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 RSL T + L SV + + L LPY +AL+PAI + M++H+ KHH+AYV N N + + + L+K D ++QLQ A++ NGGGH NH+ FW++LA ++ G P +L I FGSL+A QK + Sbjct: 3 RSLKTTLIL-LASSV-ISMSALAEFKQAPLPYATNALQPAIDQQTMEIHYGKHHKAYVDNLNAQI-KTYPELDKTD---LIQLQKQISKYNTAVRNNGGGHFNHTFFWESLAATNKTG--QPSPALVKQITQDFGSLDAFKQKFN 139 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |