CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRP1 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M1 GN=sodA PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.019e-15 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 118 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 + LP+LPY Y ALEP E M LHH KHH YV N N A+E+ L + L V T ++ + NGGGH+NH++FW+ L+P + + AID FGS +A ++ +A Sbjct: 3 IILPELPYAYDALEPQFDAETMTLHHDKHHATYVANTNAALEKHPEIGENLEELLADV-TKIPEDIRQTLINNGGGHLNHALFWELLSPEK----QDVTPDVAQAIDDAFGSFDAFKEQFTA 119
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_HAEDU (Superoxide dismutase [Mn] OS=Haemophilus ducreyi GN=sodA PE=3 SV=4) HSP 1 Score: 82.4185 bits (202), Expect = 1.019e-15 Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 115 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD-------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEA 441 T LP+L Y Y ALEP E M++HH KHHQAYV N N +E+ + L K T + + A++ N GGHVNH++FWK L G +L AI FGS+EA Sbjct: 2 TYQLPELGYAYDALEPYFDKETMEIHHSKHHQAYVNNSNALLEKHPELLEKCPGALLKDLTQVPAEKRTAVRNNLGGHVNHTLFWKGLKT-----GTTLQGALKDAIIRDFGSVEA 112
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STAXY (Superoxide dismutase [Mn/Fe] OS=Staphylococcus xylosus GN=sodA PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.330e-15 Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 LP+LPY + ALEP I + M++HH KHH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L P E G ++ I +GSL+A ++ + Sbjct: 5 LPNLPYGFDALEPHIDQQTMEIHHGKHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKG-----TVVDKIKEQWGSLDAFKEEFA 117
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_PASMU (Superoxide dismutase [Mn] OS=Pasteurella multocida GN=sodA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.738e-15 Identity = 51/115 (44.35%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL--------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEA 441 TLP+L Y Y ALEP M++HH KHHQAYV N N A+E L Q L K+ +L AI+ N GGH+NHS+FWK+L G +L AI FGS+EA Sbjct: 4 TLPELGYAYDALEPHFDAMTMEIHHSKHHQAYVNNANAALENLPELAQGCPGQLLTKLAEVPADKLT-AIRNNVGGHLNHSLFWKSLKK-----GTTLQGALKDAIVRDFGSVEA 112
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 1.738e-15 Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV---EQLFQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQ 450 LP+LPYDY+ALEP IS ++ HH KHH AYV N+N AV + Q++ V + A FN NHS +W + P GGG P +L I+ FGS +A ++ Sbjct: 5 LPNLPYDYTALEPCISKSTLEFHHDKHHAAYVNNFNNAVAGTDLDNQSIEDVIKAVAGDASKAGIFNNAAQAWNHSFYWNCMKP---GGGGQPSGALADKINADFGSFDAFVE 114
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_BACCR (Superoxide dismutase [Mn] 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.269e-15 Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 109 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNK--------VDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 + + LP L YDY LEP I + +HH KHH YV N N +E + NK +DT ++ A++ NGGGH HS+FW+ ++P GGGE P+ + ID +F + + L ++S Sbjct: 1 MSSFQLPKLSYDYDELEPHIDSNTLSIHHGKHHATYVNNLNATLENYTELHNKSLEELLCNLDT-LPKEIVTAVRNNGGGHYCHSLFWEVMSP--RGGGE-PNGDVAKVIDYYFNTFDNLKDQLS 121
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRPY (Superoxide dismutase [Mn] OS=Streptococcus pyogenes GN=sodA PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.964e-15 Identity = 45/121 (37.19%), Postives = 70/121 (57.85%), Query Frame = 1 Query: 118 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 + LP+LPY Y ALEP E M LHH KHH YV N + A+E ++ + L ++ D + + ++ A+ NGGGH+NH++FW+ L+P + + AID FGS +A ++ +A Sbjct: 3 IILPELPYAYDALEPQFDAETMTLHHDKHHATYVANTDAALEKHPEIGENLEELLADVPKIPEDIRQALINNGGGHLNHALFWELLSPEK----QDVTPDVAQAIDDAFGSFDAFKEQFTA 119
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.964e-15 Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 118 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+ FGS E Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFE 111
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.964e-15 Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 118 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+ FGS E Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFE 111
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.964e-15 Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 118 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+ FGS E Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFE 111 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |