CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_SULSO (Superoxide dismutase [Fe] OS=Sulfolobus solfataricus GN=sod PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 4.280e-14 Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQ 450 LP LPY ALEP IS +I+ +H+ HH+ YV N +E+L + + + +QG I+ FN GH H+++W+N+AP +GGG+ P +L I+ +GS + Q Sbjct: 12 LPPLPYKIDALEPYISKDIIDVHYNGHHKGYVNGANSLLERLEKVVKGDLQTGQYDIQGIIRGLTFNINGHKLHALYWENMAPSGKGGGK-PGGALADLINKQYGSFDRFKQ 122
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_SULAC (Superoxide dismutase [Fe] OS=Sulfolobus acidocaldarius GN=sod PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 4.280e-14 Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 109 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 L+ P LPY ALEP IS +I+ +H+ HH+ YV N +++L + + LQG ++ FN GH H+I+W N+AP +GGG+ P +L I+ +GS + Q S Sbjct: 7 LKRYEFPQLPYKVDALEPYISKDIIDVHYNGHHKGYVNGANSLLDRLEKLIKGDLPQGQYDLQGILRGLTFNINGHKLHAIYWNNMAPAGKGGGK-PGGALADLINKQYGSFDRFKQVFS 125
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MYCKA (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium kansasii GN=sodA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.590e-14 Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 187 LHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 LHH KHH YV N AV +L +A K D S ++ + + FN GHVNH+I+WKNL+P GG+ P L AID FGS + Sbjct: 1 LHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKNLAFNLAGHVNHTIWWKNLSP---NGGDKPTGELAAAIDEAFGSFD 81
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_STAAW (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MW2) GN=sodM PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.590e-14 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGG 381 LP+LPY Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKG 96
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_STAAS (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MSSA476) GN=sodM PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.590e-14 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGG 381 LP+LPY Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKG 96
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_STAAR (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MRSA252) GN=sodM PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.590e-14 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGG 381 LP+LPY Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKG 96
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_STAAN (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain N315) GN=sodM PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.590e-14 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGG 381 LP+LPY Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKG 96
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_STAAM (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sodM PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.590e-14 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGG 381 LP+LPY Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKG 96
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_STAAC (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain COL) GN=sodM PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.590e-14 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGG 381 LP+LPY Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKG 96
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_STAAB (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodM PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.590e-14 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGG 381 LP+LPY Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKG 96 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |