CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_STAA8 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain NCTC 8325) GN=sodM PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.590e-14 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGG 381 LP+LPY Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKG 96
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM2_STAA3 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain USA300) GN=sodM PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.590e-14 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGG 381 LP+LPY Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G Sbjct: 5 LPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKG 96
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MYCCH (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium chelonae GN=sodA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 9.535e-14 Identity = 39/90 (43.33%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 193 HQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 H KHH AYV N AV +L +A K D + + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + +A Sbjct: 2 HSKHHAAYVAGVNSAVAKLEEAREKGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPTGDLAAAIDDQFGSFDKFQAQFTA 88
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MYCSC (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium scrofulaceum GN=sodA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.245e-13 Identity = 40/92 (43.48%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 187 LHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 LHH KHH YV N AV +L +A D + + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + SA Sbjct: 1 LHHSKHHATYVKGVNDAVAKLQEARANDDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSA 89
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MYCIT (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium intracellulare GN=sodA PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.626e-13 Identity = 39/92 (42.39%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 187 LHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 LHH KHH YV N A+ +L +A D + + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + SA Sbjct: 1 LHHSKHHATYVKGVNDALSKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---DGGDKPTGELAAAIDDAFGSFDRFRAQFSA 89
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.124e-13 Identity = 43/112 (38.39%), Postives = 56/112 (50.00%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL---FQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALI 447 LP LP+DY+AL P I+ E ++ HH KHH AYV NYN AV+ Q + V + A FN NHS +W ++ P GG P +L I FGS E + Sbjct: 5 LPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAVKDTDLDGQPIEAVIKAIAGDASKAGLFNNAAQAWNHSFYWNSIKP---NGGGAPTGALADKIAADFGSFENFV 113
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_BUCBP (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=sodA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.774e-13 Identity = 36/89 (40.45%), Postives = 48/89 (53.93%), Query Frame = 1 Query: 115 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNK----------AVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWK 351 T LP LPY Y++LEP + M +HH +HHQAY+ N N +E+L LN + + LQ N GGH+NHS+FWK Sbjct: 2 TYVLPSLPYSYNSLEPFFDEKTMIIHHTRHHQAYINNTNSILNGTHYENLLIEELISKLNILSIENKLALQN----NAGGHINHSLFWK 86
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_LEGPH (Superoxide dismutase [Fe] OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=sodB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.774e-13 Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 115 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL-FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 T TLP LPY AL P +S E ++ H+ KHH YVTN NK + F+++ + +++ +G I N NH+ +W +++P GGGE P L AI+ FGS A ++ S Sbjct: 2 TFTLPQLPYALDALAPHVSKETLEYHYGKHHNTYVTNLNKLIPGTEFESMTLEE--IIMKAKGGIFNNAAQVWNHTFYWHSMSP--NGGGE-PKGRLAEAINKSFGSFAAFKEQFS 112
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MYCMR (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium marinum GN=sodA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.623e-13 Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 193 HQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 H KHH YV N AV +L +A K D ST++ + + FN GHVNH+I+WKNL+P GG+ P L AID FGS + Sbjct: 2 HSKHHATYVKGANDAVTKLEEARAKEDHSTILLNEKNLAFNLAGHVNHTIWWKNLSP---NGGDKPTGELAAAIDEAFGSFD 80
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_BORPE (Superoxide dismutase [Mn] OS=Bordetella pertussis GN=sodA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.623e-13 Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA-----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEP 387 LP L Y Y ALEP I M++HH +HHQ YV N A VEQL + + + + GA++ +GGGH NHS+ W ++P GGG P Sbjct: 5 LPALSYAYDALEPHIDARTMEIHHTRHHQTYVNGLNAALEGAGLDSEEPVEQLLRRIPALPPG----IHGAVRNHGGGHANHSLLWTVMSP--SGGGRP 97 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |