CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_BORPE (Superoxide dismutase [Fe] OS=Bordetella pertussis GN=sodB PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.054e-12 Identity = 42/108 (38.89%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEA 441 TLP LPY AL P IS E ++ H+ KHHQ YVTN N + + +V+ FN V NH+ +W +L+P GGGE P +L AI +GS++A Sbjct: 4 TLPPLPYALDALAPRISKETLEFHYGKHHQTYVTNLNNLIPG--TEFENLSLEEIVKKSSGGVFNNAAQVWNHTFYWNSLSP--NGGGE-PSGALADAIKAKWGSVDA 106
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MYCSZ (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium szulgai GN=sodA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.798e-12 Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 193 HQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 H KHH YV N AV +L +A + D S+++ + + FN GHVNH+I+WKNL+P GG+ P L AID FGS + + A Sbjct: 2 HSKHHATYVKGANDAVAKLEEARAQEDFSSILLSEKNLAFNLAGHVNHTIWWKNLSP---NGGDKPTGELAAAIDDAFGSFDTFSAQFHA 88
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.067e-12 Identity = 38/115 (33.04%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV--------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEAL 444 LP+L YDY A+EP I + M++HH KHH +V N N +E++ + ++ D S ++ + Q I+ N GG+ NH+++++ L P G + I+ FGSL+ L Sbjct: 4 LPELGYDYDAVEPYIDAKTMEIHHSKHHNGFVMNLNSILEKMGK-IHLTDVSNILKNIHDFPEEFQTLIRNNAGGYSNHTLYFRTLRP---GNKDNLFEKFKDDINAAFGSLDVL 114
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STROR (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus oralis GN=sodA PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.006e-12 Identity = 40/97 (41.24%), Postives = 52/97 (53.61%), Query Frame = 1 Query: 166 ISGEIMQLHHQKHHQAYVTNYNKAVE------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 I E M LHH KHHQAYV N N A+E + +AL S ++ A+ NGGGH+NH++FW+ + P P + L AID FGS E Sbjct: 2 IDAETMHLHHDKHHQAYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFE 94
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.006e-12 Identity = 42/115 (36.52%), Postives = 58/115 (50.43%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV----QLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQK 453 LPDLPYD + +P + E HH KHH AYV N N ++ + L K D ++ Q A FN + NHS FW ++ P +GGG+P L I+ FGS E ++ Sbjct: 16 LPDLPYDKESFKPHFTPETFDYHHGKHHNAYVQNLNNLLKDK-EELQKKDLEEIIEWSSQNSNAAIFNNAAQIWNHSFFWHSIKP--QGGGKPSGKILE-QINKDFGSFEGFCEQ 126
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.006e-12 Identity = 43/109 (39.45%), Postives = 56/109 (51.38%), Query Frame = 1 Query: 115 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 T L LPY AL P IS E ++ HH KH + YV N NK + + D +T+VQ +G I N G +NH++++ P G G P LG AID FGS E Sbjct: 2 THELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLI--IGTEFENADLNTIVQKSEGGIFNNAGQTLNHNLYFTQFRP---GKGGAPKGKLGEAIDKQFGSFE 105
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 5.232e-12 Identity = 44/117 (37.61%), Postives = 57/117 (48.72%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ----LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 LP+LPYDY AL P +S E ++ HH KHH AYVTN NK E+ L+ + +V+ + N G H NH FWK + GGG L AI + G + SA Sbjct: 5 LPNLPYDYDALAPYMSRETLEYHHDKHHLAYVTNGNKLAEE--AGLSDLSLEDIVKKSYGTNQPLFNNAGQHYNHVHFWKWMK--KGGGGTSLPGKLDAAIKSDLGGYDKFRADFSA 117
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_AGABI (Superoxide dismutase [Mn], mitochondrial OS=Agaricus bisporus GN=sod PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.833e-12 Identity = 44/109 (40.37%), Postives = 57/109 (52.29%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKF--NGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEAL 444 LPDLPY Y ALEP IS +IM+LHH+K Q + + T+ V ++ F GH+NHS+FW+NLAP GG+ L AID FG L+ L Sbjct: 5 LPDLPYAYDALEPYISRQIMELHHKKTSSDLCE-----CAQHCRGCLRHSTAVVGGFDLSLFFILTTLGHINHSLFWQNLAPAAGAGGQLKPGPLKDAIDQTFGGLDNL 108
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_PSEAE (Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa GN=sodB PE=3 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 8.924e-12 Identity = 41/105 (39.05%), Postives = 54/105 (51.43%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 LP LPY+ +ALEP IS E ++ HH KHH YV N N + + K V G I N NH+ +W L+P GGG+P +L AI+ FGS + Sbjct: 5 LPPLPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIPGT-EFEGKSLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP--NGGGQPT-GALADAINAAFGSFD 105
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRMT (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus mitis GN=sodA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.166e-11 Identity = 39/97 (40.21%), Postives = 51/97 (52.58%), Query Frame = 1 Query: 166 ISGEIMQLHHQKHHQAYVTNYNKAVE------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 I E M LHH KHHQ YV N N A+E + +AL S ++ A+ NGGGH+NH++FW+ + P P + L AID FGS E Sbjct: 2 IDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFE 94 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |