CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRPA (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus parasanguis GN=sodA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.522e-11 Identity = 40/98 (40.82%), Postives = 52/98 (53.06%), Query Frame = 1 Query: 166 ISGEIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 I E M LHH KHHQ YV N N A+E+ L L V+ S ++ A+ NGGGH+NH++FW+ + P P + L AID FGS E Sbjct: 2 IDEETMHLHHDKHHQTYVNNVNAALEKHPEIGEDLESLLADVE-SIPADIRQAVINNGGGHLNHALFWELMTPEQTA----PSAELAAAIDATFGSFE 94
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_PSEPK (Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440) GN=sodB PE=3 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 1.988e-11 Identity = 41/105 (39.05%), Postives = 53/105 (50.48%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 LP LPY + AL+P IS E ++ HH KHH YV N N V + K V G I N NH+ +W L+P GGG+P +L AI+ FGS + Sbjct: 5 LPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGT-EFEGKTLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP--NGGGQPT-GALADAINAAFGSFD 105
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MYCPH (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium phlei GN=sodA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.597e-11 Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 1 Query: 193 HQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 H KHH YV N A+ +L +A D + + + F+ GGHVNH+I+WKNL+P GG+ P L AID FGS + Sbjct: 2 HSKHHATYVKGVNDAIAKLEEARANGDHGAIFLHEKNLAFHLGGHVNHTIWWKNLSP---HGGDKPTGDLAAAIDDQFGSFD 80
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_PSEPU (Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 4.429e-11 Identity = 41/105 (39.05%), Postives = 52/105 (49.52%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 LP LPY + AL+P IS E ++ HH KHH YV N N V + K V G I N NH+ +W LAP GG+P +L AI+ FGS + Sbjct: 5 LPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGT-EFEGKTLEEIVKTSSGGIFNNAAQVWNHTFYWNCLAP--NAGGQPT-GALADAINAAFGSFD 105
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_RICBR (Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C) GN=sodB PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11 Identity = 40/118 (33.90%), Postives = 59/118 (50.00%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV----QLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 LP+LPY+ + +P + E + HH KHH AYV N N ++ + L K + ++ Q Q FN V NH+ FW ++ P GGG+P L I+ FGS E ++ A Sbjct: 16 LPNLPYEKESFKPHFTAETFEYHHGKHHNAYVQNLNNLLKDK-EELQKKNLEEIIDWSSQNQNIAIFNNAAQVWNHTFFWHSIKP--NGGGKPSGKILK-QINEDFGSFEEFCEQFKA 129
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_PSEHT (Superoxide dismutase [Fe] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=sodB PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11 Identity = 38/112 (33.93%), Postives = 55/112 (49.11%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 LP LPY ALEP IS E ++ HH KHH YV N + + NK V G + N NH+ +W +L+P GG P ++ AI+ +GS +A + ++ Sbjct: 4 LPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGT-KFENKSLEEIVCSSDGGVFNNAAQIWNHTFYWNSLSP---NGGGAPTGAVADAINAKWGSFDAFKEALN 111 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |