CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MACMU (Superoxide dismutase [Mn], mitochondrial OS=Macaca mulatta GN=SOD2 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 1.240e-29 Identity = 65/114 (57.02%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS E +K++A Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTA 113
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_MACFU (Superoxide dismutase [Mn], mitochondrial OS=Macaca fuscata fuscata GN=SOD2 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 1.240e-29 Identity = 65/114 (57.02%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS E +K++A Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTA 113
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM1_CAEEL (Superoxide dismutase [Mn] 1, mitochondrial OS=Caenorhabditis elegans GN=sod-2 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.240e-29 Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 +LPDLPYDY+ LEP IS EIMQLHHQKHH YV N N+ E+L +A++K + + LQ A+KFNGGGH+NHSIFW NLA + GGE P + L AI + FGSL+ L +++SA Sbjct: 27 SLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLA---KDGGE-PSAELLTAIKSDFGSLDNLQKQLSA 136
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_SCHPO (Superoxide dismutase [Mn], mitochondrial OS=Schizosaccharomyces pombe GN=sod2 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.114e-29 Identity = 71/122 (58.20%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 103 RGLQT-VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHS-SLGWAIDTHFGSLEALIQKMSA 462 RG+ T TLP LPY Y+ALEPA+S IM+LHH KHHQ YV N N A E+L A +D V LQ AIKFNGGGH+NHS+FWK LAP EGGG+P S SL AI + +GSLE ++M+A Sbjct: 20 RGVHTKATLPPLPYAYNALEPALSETIMKLHHDKHHQTYVNNLNAAQEKL--ADPNLDLEGEVALQAAIKFNGGGHINHSLFWKILAPQKEGGGKPVTSGSLHKAITSKWGSLEDFQKEMNA 139
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_PONPY (Superoxide dismutase [Mn], mitochondrial OS=Pongo pygmaeus GN=SOD2 PE=2 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 2.114e-29 Identity = 65/117 (55.56%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 112 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + +K++A Sbjct: 24 QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTA 137
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_HUMAN (Superoxide dismutase [Mn], mitochondrial OS=Homo sapiens GN=SOD2 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 2.114e-29 Identity = 65/117 (55.56%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 112 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + +K++A Sbjct: 24 QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTA 137
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_PANTR (Superoxide dismutase [Mn], mitochondrial OS=Pan troglodytes GN=SOD2 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 2.761e-29 Identity = 64/114 (56.14%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + +K++A Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTA 113
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_HYLLA (Superoxide dismutase [Mn], mitochondrial OS=Hylobates lar GN=SOD2 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 2.761e-29 Identity = 64/114 (56.14%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + +K++A Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTA 113
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_CEBAP (Superoxide dismutase [Mn], mitochondrial OS=Cebus apella GN=SOD2 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 4.710e-29 Identity = 63/114 (55.26%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + ++++A Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNDTEEKYKEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKERLTA 113
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_CALJA (Superoxide dismutase [Mn], mitochondrial OS=Callithrix jacchus GN=SOD2 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 4.710e-29 Identity = 63/114 (55.26%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + ++++A Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNDTEEKYKEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKERLTA 113 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |