CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_ASPFU (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus fumigatus GN=sodB PE=1 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 2.858e-26 Identity = 58/110 (52.73%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 112 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSS-LGWAIDTHFGSLE 438 Q TLP LPY Y AL+P IS +IM+LHH+KHHQ YV N A+E +A D +V +Q AIKFNGGGH+NHS+FWKNLAP GGG+ + L AI+ +GS + Sbjct: 3 QQYTLPPLPYPYDALQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEANDVPKLVSVQQAIKFNGGGHINHSLFWKNLAPEKSGGGKIDQAPVLKAAIEQRWGSFD 112
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_BRAFL (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Branchiostoma floridae PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.732e-26 Identity = 59/99 (59.60%), Postives = 69/99 (69.70%), Query Frame = 1 Query: 166 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 IS EIMQ+HHQKHH YV N N A EQL +A++K D + ++ LQ AIKFNGGGH+NHSIFW NL P GGGEP L AI FGS EA +KM+A Sbjct: 2 ISAEIMQVHHQKHHATYVNNLNAAEEQLAEAIHKQDVTKMIALQSAIKFNGGGHINHSIFWNNLCP--SGGGEPT-GPLAEAITRDFGSFEAFKEKMTA 97
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_NEUCR (Superoxide dismutase [Mn], mitochondrial OS=Neurospora crassa GN=sod-2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.874e-26 Identity = 60/123 (48.78%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 100 LRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVH--EGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 + GL T +LP LPY Y+ALEP IS +IM+LHH KHHQ YVTN N A++ A+ D + Q AIKFNGGGH+NHS+FWKNLAP E SL I+ +GS + + SA Sbjct: 28 MAGLATYSLPQLPYAYNALEPYISAQIMELHHSKHHQTYVTNLNNALKVHVAAIASSDIPAQIAQQPAIKFNGGGHINHSLFWKNLAPAETPETNYSKAAPSLAAEIEKTWGSFDEFKKAFSA 150
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_DEBHA (Probable superoxide dismutase [Mn], mitochondrial OS=Debaryomyces hansenii GN=DEHA2E01232g PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.874e-26 Identity = 56/121 (46.28%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 106 GLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHS--SLGWAIDTHFGSLEALIQKMSA 462 G + LP L + Y +LEP ISG+I ++HH+KHHQ YV YN A+EQL +A ++ D + +Q IKF+GGGH NH +FWK+LAP + GG+ P S +LG I +GS++ LI +A Sbjct: 8 GKNKIELPQLDWAYDSLEPYISGKINEIHHKKHHQTYVNGYNSAIEQLIEAESQGDVKKAIVIQQNIKFHGGGHTNHVLFWKSLAPNSQNGGKHPGSDTNLGKKIIEQYGSIDNLISITNA 128
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_PENCH (Superoxide dismutase [Mn], mitochondrial OS=Penicillium chrysogenum GN=SOD PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 8.314e-26 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 112 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNL----APVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 QT TLP LPY Y ALEP IS +IM+LHHQKHHQ Y+ N N A+ A D T++ LQ ++FNGGGH+NHS+FWKNL P ++ G P +L AI + +GS EA ++ A Sbjct: 4 QTHTLPPLPYAYDALEPVISKQIMELHHQKHHQTYINNLNAALSAQASATASNDVPTLISLQQKLRFNGGGHINHSLFWKNLTPPGTPANDIAGAP---ALREAIVSRWGSHEAFVKAFGA 121
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODB_ASPNG (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus niger GN=sodB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.419e-25 Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHS--SLGWAIDTHFGSLE 438 TLPDLPYDY ALEP IS +IM+LHH+KHHQ YV N N A+ AL+ D + ++ +Q +KFNGGGH+NHS+FWKNLA S SL AI+ +GS++ Sbjct: 6 TLPDLPYDYDALEPIISKQIMELHHKKHHQTYVNNLNAALASQASALDSNDITQLISIQQKLKFNGGGHINHSLFWKNLARYDSPATNLERSAPSLKDAIEKQWGSVK 113
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_NOCAS (Superoxide dismutase [Mn] OS=Nocardia asteroides GN=sodA PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.568e-24 Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 TLPDL YDYSALEP ISG+I +LHH KHH AYV N A+E+L A D S + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + +A Sbjct: 5 TLPDLDYDYSALEPHISGQINELHHSKHHAAYVAGANTALEKLEAAREAGDHSAIFLHEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPVGELAAAIDDQFGSFDKFRAQFTA 115
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_GLOMM (Superoxide dismutase [Mn], mitochondrial OS=Glossina morsitans morsitans GN=Sod2 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.493e-24 Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = 1 Query: 76 LGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 L +++ +RG T LP LPYDY AL P IS +I+++HH KHHQ YV N N EQ+ +A +K D + VV+L FN GGH+NHSI+W+NL+P P + L AI+ F S E + +SA Sbjct: 8 LSRTIKAAVRGKHT--LPKLPYDYGALAPIISKDILEVHHGKHHQTYVNNLNAVEEQMTEAHSKKDVNKVVELSKNYAFNWGGHLNHSIYWQNLSPTK----SEPSADLKKAIEEQFSSFEQFKKDLSA 130
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_GANMI (Superoxide dismutase [Mn], mitochondrial OS=Ganoderma microsporum PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.493e-24 Identity = 59/118 (50.00%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT-STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHE----GGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 LPDLPY Y+ALEP IS +IM+LHH+KHHQ YV + N A QA K T + LQ A+KFNGGGH+NHS+FWKNLAP GG L AI+ ++GS++ I++ +A Sbjct: 5 LPDLPYAYNALEPFISQQIMELHHKKHHQTYVNSLNAAE----QAYAKASTPKERIALQSALKFNGGGHINHSLFWKNLAPAKSEGKGNGGALADGPLKSAIEQNWGSVDNFIKEFNA 118
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_ASPOR (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus oryzae GN=sodB PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 4.562e-24 Identity = 56/118 (47.46%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 115 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAP--VHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 T +LP LPY Y ALEP I +IM++HHQKHHQ Y+TN N A+ AL + ++ LQ IKFNGGGH+NHS+FWKNLAP E + L AI+ +GS+E + A Sbjct: 4 TFSLPPLPYAYDALEPVICKQIMEIHHQKHHQTYITNLNAALSAQSTALAANNIPQLINLQQKIKFNGGGHINHSLFWKNLAPHASPETNIDQAAPVLKAAIEAQYGSVEKFKEAFGA 121 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |