CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_STRCO (Superoxide dismutase [Fe-Zn] 1 OS=Streptomyces coelicolor GN=sodF1 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 1.519e-19 Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 109 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPH----SSLGWAIDTHFGS 432 + TLP+LPYDYSAL P IS EI++LHH KHH AYV N +EQL +A +K ++ L+ + F+ GH+ HSI+W N+ +GGGEP L AI FGS Sbjct: 1 MSVYTLPELPYDYSALAPVISPEIIELHHDKHHAAYVKGANDTLEQLAEARDKETWGSINGLEKNLAFHLSGHILHSIYWHNM--TGDGGGEPLDKDGVGELADAIAESFGS 110
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_XANCP (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris GN=sodA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.984e-19 Identity = 51/112 (45.54%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 TLP LPY Y ALEP I + M++HH KHHQ Y+ N N A+E A V+ S LQG ++ NGGGH NHS+FW ++P GGGE P + AID G E Sbjct: 4 TLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYADLPVEELVSKLKSLPENLQGPVRNNGGGHANHSLFWTVMSP--NGGGE-PKGEVAKAIDKDIGGFE 112
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_XANC8 (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sodA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.984e-19 Identity = 51/112 (45.54%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 TLP LPY Y ALEP I + M++HH KHHQ Y+ N N A+E A V+ S LQG ++ NGGGH NHS+FW ++P GGGE P + AID G E Sbjct: 4 TLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYADLPVEELVSKLKSLPENLQGPVRNNGGGHANHSLFWTVMSP--NGGGE-PKGEVAKAIDKDIGGFE 112
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_ENTFA (Superoxide dismutase [Fe] OS=Enterococcus faecalis GN=sodA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.984e-19 Identity = 52/121 (42.98%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 115 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN-----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEAL 444 T TLP+LPY Y ALEP I E M LHH KHH YVTN N K+VE L +N + ++ A++ NGGGH NH+ FW+ +AP GG+P ++ AID FGS + + Sbjct: 2 TYTLPELPYAYDALEPYIDVETMHLHHDKHHNTYVTNLNAAIEKHPELGEKSVENLISDMNAIPE----DIRTAVRNNGGGHANHTFFWEIMAP--NAGGQPT-GAIKEAIDETFGSFDEM 115
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_PSEPU (Superoxide dismutase [Mn] OS=Pseudomonas putida GN=sodA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.591e-19 Identity = 52/117 (44.44%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEA 441 TLP LPY Y ALEP I + M++HH KHHQ YV N A VE+L A+ ++ S L+GA+ +GGGH NHS+FW ++P +GGGE PH L AI + G +A Sbjct: 4 TLPALPYAYDALEPHIDAQTMEIHHTKHHQTYVNGLNAAIEGTEWAEWPVEKLVGAVKQLPES----LRGAVTNHGGGHANHSLFWTVMSP--QGGGE-PHGQLAQAIASQLGGFDA 113
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_METJ (Superoxide dismutase [Mn/Fe] OS=Methylomonas J GN=sodB PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.591e-19 Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 121 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 TLP L Y Y+ALEP I + M++HH KHHQ Y+ N N A+E + +AL + S L+G ++ NGGGH NHS+FWK L P GGGE P +L AI + G L+ Sbjct: 3 TLPPLDYAYTALEPHIDAQTMEIHHTKHHQTYINNVNAALEGTSFANEPVEALLQKLDSLPENLRGPVRNNGGGHANHSLFWKVLTP--NGGGE-PKGALADAIKSDIGGLD 111
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM1_BACAN (Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.419e-19 Identity = 51/123 (41.46%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN-----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 LP+LPY Y ALEP E M +HH KHH Y+TN N K+VE+L LN+V + ++ A++ NGGGH NH+ FW L+P GGG+P L AI+ FGS +A ++ + Sbjct: 6 LPNLPYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELADKSVEELVANLNEVPEA----IRTAVRNNGGGHANHTFFWTILSP--NGGGQPV-GELATAIEAKFGSFDAFKEEFA 121
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.771e-19 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 115 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV-------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 T LP LPY Y ALEP E M++H+ KHH YVT N+AV + +K V +++GA++ +GGGH NH++FW +L+P GG P +L AI++ FG+ + +K +A Sbjct: 2 TYELPKLPYTYDALEPNFDKETMEIHYTKHHNIYVTKLNEAVSGHAELASKPGEELVANLDSVPEEIRGAVRNHGGGHANHTLFWSSLSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNA 121
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 5.771e-19 Identity = 54/119 (45.38%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG-------AIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 LP LPY Y ALEP I E M +HH KHH YVTN N A+E NK + L+ A++ NGGGH NHS+FW L+P GGGEP L AI+ FGS A + S Sbjct: 5 LPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALEGHPDLQNKSLEELLSNLEALPESIRTAVRNNGGGHANHSLFWTILSP--NGGGEPT-GELAEAINKKFGSFTAFKDEFS 120
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_BACST (Superoxide dismutase [Mn] OS=Bacillus stearothermophilus GN=sodA PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 7.537e-19 Identity = 54/119 (45.38%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG-------AIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 LP LPY Y ALEP I E M +HH KHH YVTN N A+E NK + L+ A++ NGGGH NHS+FW L+P GGGEP L AI+ FGS A + S Sbjct: 5 LPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALEGHPDLQNKSLEELLSNLEALPESIRTAVRNNGGGHANHSLFWTILSP--NGGGEPT-GELADAINKKFGSFTAFKDEFS 120 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |