CN187730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM1_PLEBO (Superoxide dismutase [Mn] 1 OS=Plectonema boryanum GN=sodA1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.537e-19 Identity = 52/123 (42.28%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN-----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 L LPYDY+ALEP I + M+LHH KHH YV N N ++V+ L Q LN+V + ++ I+ NGGGHVNH++FW+ +AP + GG P ++ AID FGS +A Q+ + Sbjct: 46 LDPLPYDYAALEPYIDAQTMRLHHDKHHATYVNNINETLKAYPDLQKQSVDSLIQNLNQVPEA----IRTKIRNNGGGHVNHTMFWQIMAP--KAGGTPT-GAVAKAIDQTFGSFDAFKQQFN 161
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_PALVU (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Palinurus vulgaris PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 9.844e-19 Identity = 49/98 (50.00%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 166 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 IS IMQ+HH KHHQAY+ N E+L QA D + + L AIKFNGGGH+NH+IFW N+AP GGEP + AI FGS +A K S Sbjct: 2 ISEMIMQIHHTKHHQAYINNLKACTEKLKQAEQANDVAAMNALLPAIKFNGGGHINHTIFWTNMAP--SAGGEPA-GPVADAITKEFGSFQAFKDKFS 96
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_KLEPL (Superoxide dismutase [Fe] (Fragment) OS=Klebsiella planticola GN=sodA PE=1 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 9.844e-19 Identity = 48/118 (40.68%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 LP LPY Y ALEP I + ++HH KHH YVTN N AVE A ++ + Q A++ NGGGH NH++FW+ +AP GG P + AID FGS +A ++ + Sbjct: 5 LPQLPYAYDALEPHIDAKTXEIHHSKHHNTYVTNLNAAVEGTEFADKDINDLIAMLDALPADKQTAVRNNGGGHANHTLFWEVIAP---GGSNTPVGEVAKAIDAKFGSFDAFKEEFA 119
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_AERPE (Superoxide dismutase [Mn/Fe] OS=Aeropyrum pernix GN=sod PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.193e-18 Identity = 49/113 (43.36%), Postives = 63/113 (55.75%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 LP LPY+Y+ALEP I EIM+LHHQKHH YV N A+E++ + L V + FN GH+ H+IFW N+AP +GGG P + I+ FG E SA Sbjct: 9 LPPLPYNYNALEPYIIEEIMKLHHQKHHNTYVKGANAALEKIEKHLKGEIQIDVRAVMRDFSFNYAGHIMHTIFWPNMAPPGKGGG-TPGGRVADLIEKQFGGFEKFKALFSA 120
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_PSEAE (Superoxide dismutase [Mn] OS=Pseudomonas aeruginosa GN=sodA PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 2.864e-18 Identity = 50/112 (44.64%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV------EQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEA 441 LP LPY Y ALEP I M++HH KHHQ YV N N A+ EQ ++L + +L+ + NGGGH NHS+FW ++P +GGG P LG AID G EA Sbjct: 5 LPPLPYAYDALEPHIDALTMEIHHSKHHQTYVNNLNAALEGTPYAEQPVESLLRQLAGLPEKLRTPVVNNGGGHANHSLFWTVMSP--QGGGR-PDGDLGRAIDEQLGGFEA 113
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODF_METTH (Superoxide dismutase [Fe] OS=Methanobacterium thermoautotrophicum GN=sod PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.864e-18 Identity = 51/115 (44.35%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMS 459 LP+LPY Y ALEP IS E + +HHQKHHQAYV N + +L +A ++ T V ++ A+K F+ GG+V H FW N+ P E GGE P L I+ FGS E ++ S Sbjct: 11 LPELPYPYDALEPHISREQLTIHHQKHHQAYVDGANALLRKLDEAR---ESDTDVDIKAALKELSFHVGGYVLHLFFWGNMGPADECGGE-PSGKLAEYIEKDFGSFERFRKEFS 121
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRR6 (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sodA PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 3.741e-18 Identity = 49/113 (43.36%), Postives = 63/113 (55.75%), Query Frame = 1 Query: 118 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 + LP+LPY Y ALEP I E M LHH KHHQ YV N N A+E + +AL S ++ A+ NGGGH+NH++FW+ + P P + L AID FGS E Sbjct: 3 IILPELPYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFE 111
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_STRPN (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae GN=sodA PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 3.741e-18 Identity = 49/113 (43.36%), Postives = 63/113 (55.75%), Query Frame = 1 Query: 118 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 + LP+LPY Y ALEP I E M LHH KHHQ YV N N A+E + +AL S ++ A+ NGGGH+NH++FW+ + P P + L AID FGS E Sbjct: 3 IILPELPYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFE 111
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM_LISMO (Superoxide dismutase [Mn] OS=Listeria monocytogenes GN=sodA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.741e-18 Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 115 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSA 462 T LP LPY Y ALEP E M++H+ KHH YVT N+AV + +K V L +GA++ +GGGH NH++FW L+P GG P +L AI++ FG+ + +K +A Sbjct: 2 TYELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVAGHPELASKSAEELVTNLDSVPEDIRGAVRNHGGGHANHTLFWSILSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNA 121
BLAST of CN187730 vs. ExPASy Swiss-Prot
Match: SODM1_HALSA (Superoxide dismutase [Mn] 1 OS=Halobacterium salinarium GN=sod1 PE=1 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 3.741e-18 Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 124 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLE 438 LP LPYDY ALEP IS +++ HH HHQ YV +N A E L + D ++ G + NG GH+ H++FW++++P GG+ P +L I FGS E Sbjct: 6 LPPLPYDYDALEPHISEQVLTWHHDTHHQGYVNGWNDAEETLAENRETGDHASTAGALGDVTHNGSGHILHTLFWQSMSP---AGGDEPSGALADRIAADFGSYE 107 The following BLAST results are available for this feature:
BLAST of CN187730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187730 ID=CN187730; Name=CN187730; organism=Citrus sinensis; type=EST; length=463bpback to top |