CK938476

Overview
NameCK938476
Unique NameCK938476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7231 contig Csv1_Contig7231:28..962. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C14_ORYSJ (Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.250e-33
Identity = 74/188 (39.36%), Postives = 115/188 (61.17%), Query Frame = 3
Query:  417 AAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMP-----------------SSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERIIQ 929
            A++++ +G+KGVNQD  IVWE F  + D +FCG+FDGHGP GH VAK+VR+ +P                 SS+  N  ET +  ++  D + + +     F   + S+++    +D++L+ H+ ID F+SGTTA+ +++QG  +++ N+GDSRA+L T  +D  L   QLTVD KP+   EA+RI Q
Sbjct:  130 ASLYTLQGKKGVNQDAMIVWENFCSREDTIFCGVFDGHGPNGHLVAKRVRDLLPIKLGADLGTDEGRQTSTSSIKSNGDETGSPGNMGRDAEQNGEYP-EIFTALRTSFLRAFNVMDRDLKLHKSIDCFFSGTTAVAVLKQGRNLIIGNLGDSRAILGTRDKDNQLMAVQLTVDLKPNIPSEAQRIRQ 316          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C06_ARATH (Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.235e-32
Identity = 72/195 (36.92%), Postives = 112/195 (57.44%), Query Frame = 3
Query:  399 DSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIW--------------------KHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERI 923
            + S+  A +++++G+KG NQD  +VWE F  ++D + CG+FDGHGP+GH V+K+VR+ +P +L    + T           L+S         W                    K + +KTC  +D+EL+ H  I+ F SGTT++T+++QG+ ++V N+GDSRAVLAT  +D +L   QLT+D KP    E+ RI
Sbjct:   59 NGSSEIACLYTQQGKKGTNQDAMLVWENFCSRSDTVLCGVFDGHGPFGHMVSKRVRDMLPFTLSTQLKTTSGTEQSSSKNGLNSAPTCVDEEQWCELQLCEKDEKLFPEMYLPLKRALLKTCQQMDKELKMHPTINCFCSGTTSVTVIKQGKDLVVGNIGDSRAVLATRDQDNALVAVQLTIDLKPDLPSESARI 253          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C52_ARATH (Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.107e-32
Identity = 70/192 (36.46%), Postives = 113/192 (58.85%), Query Frame = 3
Query:  390 VNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEA--------------SLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERI 923
            +   S +  + +F+++G KG+NQD  IVWE+F  + D+ FCG+FDGHGP+GH VA+KVR+++P  L   +Q   ++               S + +   +   +     +W  +++K+  A+D+EL  H  +D F SG+T +TI++QG  + + N+GDSRA+L +   + S+   QLTVD KP    EAERI
Sbjct:   59 ITSSSKSRSSCIFTQQGRKGINQDAMIVWEDFMSE-DVTFCGVFDGHGPYGHLVARKVRDTLPVKLQFFFQTLQSKQNCSKGTRFRRNSSKSAVQEAVKEGSDEDKLKGLWGEAFLKSFKAMDKELRSHPNLDCFCSGSTGVTILKQGSNLFMGNIGDSRAILGSKDSNDSMVATQLTVDLKPDLPREAERI 249          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C38_ORYSJ (Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.973e-31
Identity = 73/202 (36.14%), Postives = 112/202 (55.45%), Query Frame = 3
Query:  384 GFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNW-------------QETLAEASLLPDIDLDSDKK---------THRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERI 923
            G +  + ++  A++++ RG KGVNQD  +VWE F  + D +FCG+FDGHGP+GH V+K+VR+ +P  L  N                ++ E      +D D++              F   + S ++    +D++L+ H+ IDS +SGTTA+T+++QG  +++ N+GDSRAVL T  E       QLTVD KP    EA RI
Sbjct:  108 GRIAANGASAAASLYTMRGNKGVNQDAMLVWENFCSKEDTIFCGVFDGHGPYGHLVSKRVRDLLPIKLSANLGRDGHKETSTNIVTSSMTEGGGTERMDRDTETPLGTEENGDYPEMFAALRTSLLRAFYVMDRDLKFHKTIDSVFSGTTAVTVIKQGHDLLIGNLGDSRAVLGTRDEYDQFFAVQLTVDLKPTIPSEAARI 309          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C64_ORYSJ (Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.575e-30
Identity = 67/176 (38.07%), Postives = 106/176 (60.23%), Query Frame = 3
Query:  399 DSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLAT-TSEDGSLGPGQLTVDFKPHXXYEAERI 923
            D  +  A V++++G KG+NQD  +VW+ FG + D + CG+FDGHGP GH VA++VR+S+P  L+   +++ A+                    W+ ++ +   A+D++L  H  +D F SG+TA+T+++ G  + +AN+GDSRAVL +  +  G +   QLTVD KP    EAERI
Sbjct:   48 DGRSRTATVYTQQGRKGINQDAMLVWDGFGGEDDGVLCGVFDGHGPHGHVVARRVRDSLPLRLMSAARDSGADMPAA---------------AWRKAFARAYKAMDKDLRSHPSLDCFCSGSTAVTVLKLGSDLYMANIGDSRAVLGSREATGGGMVAVQLTVDLKPDVPSEAERI 208          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C73_ORYSJ (Probable protein phosphatase 2C 73 OS=Oryza sativa subsp. japonica GN=Os11g0109000 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 72/182 (39.56%), Postives = 104/182 (57.14%), Query Frame = 3
Query:  420 AVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNW-------------QETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERII 926
            ++ +K+G KG NQD     ++F      +FCG+FDGHGP G  VA+ VR+ +P  L  +              +ETL ++      D  ++K+    + WK+ +VKT   VD++L QH  ID   SGTTA+T+VRQG+ +++AN+GDSRAVL T          QLT D KP+   EAERI+
Sbjct:   35 SMHTKQGWKGANQDAMTTCQDFAGHKGQIFCGVFDGHGPLGREVARHVRDVLPVKLSSSLALKTEQDPSSNTDKETLEKSDCTSLSDTSNEKQL--LSTWKNIFVKTFEDVDEDLRQHSGIDCICSGTTAVTVVRQGDHLIIANLGDSRAVLCTRDSKDRPISVQLTTDLKPNLPSEAERIL 214          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C65_ARATH (Probable protein phosphatase 2C 65 OS=Arabidopsis thaliana GN=At5g01700 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.013e-28
Identity = 70/182 (38.46%), Postives = 105/182 (57.69%), Query Frame = 3
Query:  390 VNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLD---SDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERII 926
            V    S+   ++  K+G+KG+NQD   VWE FG + D +FCG+FDGHGP GH +++ V E++PS +       +  +    D +++   S  +   F  ++   V     +D EL      DSF SGTTA+T+ +Q + +++AN+G SRAVL T S++ S    QLTVD KP    EAERI+
Sbjct:   39 VRTRGSSKHVSMSIKQGKKGINQDAMTVWENFGGEEDTIFCGVFDGHGPMGHKISRHVCENLPSRV----HSKIRSSKSAGDENIENNSSQSQEELFREFEDILVTFFKQIDSELGLDSPYDSFCSGTTAVTVFKQADCLVIANLGHSRAVLGTRSKN-SFKAVQLTVDLKPCVQREAERIV 215          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C12_ORYSJ (Probable protein phosphatase 2C 12 OS=Oryza sativa subsp. japonica GN=Os02g0224100 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.754e-27
Identity = 74/201 (36.82%), Postives = 107/201 (53.23%), Query Frame = 3
Query:  390 VNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETL-AEASLLPDIDL----------------------DSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERI 923
            V    +   A++FS+RG+KG NQD  I+ + FG + D +FCG+FDGHG  G F++K VR+ +P  +L +    L A+A+   D D                        +         W+ +     AA+D EL+    +D  +SGTTA+  ++QG  +++AN+GDSRAVLAT S+ G L   QLTVD KP    EA RI
Sbjct:   34 VESGGARKVASLFSQRGKKGPNQDSVILCQGFGME-DGVFCGVFDGHGRCGQFISKLVRDYLPFMILSHRNALLLADAAADDDDDAAFSDDAAASSSADSSGNSSPQPSASASAQMLEEWRQACASAFAAMDGELKLQPNLDCAFSGTTAVCAIKQGRDLIIANLGDSRAVLATMSDTGYLQAVQLTVDHKPSVPEEAARI 233          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C61_ARATH (Probable protein phosphatase 2C 61 OS=Arabidopsis thaliana GN=At4g32950 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.144e-24
Identity = 72/172 (41.86%), Postives = 95/172 (55.23%), Query Frame = 3
Query:  411 NFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKI-DSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERI 923
            N  +V S  G KG+NQD AI+   +G +   + CG+FDGHGP G FV+K VR  +PS LL +    +   S+  D              WK     +C  +D+ + + +KI D   SGTTA+  V+ G  +MVAN+GDSRAV+  TSEDG     QLT D KP    EAERI
Sbjct:   41 NLGSVSSLAGGKGLNQDAAILHLGYGTEEGAL-CGVFDGHGPRGAFVSKNVRNQLPSILLGH----MNNHSVTRD--------------WKLICETSCLEMDKRILKVKKIHDCSASGTTAVLAVKHGNQVMVANLGDSRAVMIGTSEDGETKVAQLTNDLKPSVPSEAERI 193          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C72_ARATH (Probable protein phosphatase 2C 72 OS=Arabidopsis thaliana GN=At5g26010 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.751e-22
Identity = 61/172 (35.47%), Postives = 98/172 (56.98%), Query Frame = 3
Query:  408 NNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERI 923
            +   +V S +G K +NQD A++++ +G + D   CG+FDGHG  GH V+K VR  +PS LL          +L  +++ +S+      + W+ +       +D+EL   +  +  +SG+T +  + QG+ +++AN+GDSRAVL T +EDG +   QLT D  P    EAERI
Sbjct:   41 HRLGSVCSIQGTKVLNQDHAVLYQGYGTR-DTELCGVFDGHGKNGHMVSKMVRNRLPSVLL----------ALKEELNQESNVCEEEASKWEKACFTAFRLIDRELNL-QVFNCSFSGSTGVVAITQGDDLVIANLGDSRAVLGTMTEDGEIKAVQLTSDLTPDVPSEAERI 200          
The following BLAST results are available for this feature:
BLAST of CK938476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
P2C14_ORYSJ3.250e-3339.36Probable protein phosphatase 2C 14 OS=Oryza sativa... [more]
P2C06_ARATH1.235e-3236.92Probable protein phosphatase 2C 6 OS=Arabidopsis t... [more]
P2C52_ARATH2.107e-3236.46Probable protein phosphatase 2C 52 OS=Arabidopsis ... [more]
P2C38_ORYSJ3.973e-3136.14Probable protein phosphatase 2C 38 OS=Oryza sativa... [more]
P2C64_ORYSJ2.575e-3038.07Probable protein phosphatase 2C 64 OS=Oryza sativa... [more]
P2C73_ORYSJ3.719e-2939.56Probable protein phosphatase 2C 73 OS=Oryza sativa... [more]
P2C65_ARATH7.013e-2838.46Probable protein phosphatase 2C 65 OS=Arabidopsis ... [more]
P2C12_ORYSJ7.754e-2736.82Probable protein phosphatase 2C 12 OS=Oryza sativa... [more]
P2C61_ARATH6.144e-2441.86Probable protein phosphatase 2C 61 OS=Arabidopsis ... [more]
P2C72_ARATH5.751e-2235.47Probable protein phosphatase 2C 72 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004442_C12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938476 ID=CK938476; Name=CK938476; organism=Citrus sinensis; type=EST; length=931bp
GGGGATGGATTATTGCTGCAATAATTCATCTCAAGATTTTTTCTCTAGAA
TTCTCAGCTCAATAAGGGATCACCGGGATTGCTTCGGATTCCGGCGGCTG
ACGTCAGCTTTCCGGCTATTGGTTCCGAGCCCGGCTATCTGATATTGTTT
GTTTCTCCATCAAAGATTTTGAGTCTACATAAAGGGAAAGAAGAAGCCAA
CATTGACTCTGGTGTGGGGGGATTGAATTTGAGGAAATGGGGCATTTCTC
CTCCATGTTTAACGGATTGGCAAGGTCGTTTTCAATCAGAAAAGGGAAAA
ATTCTGAGAGTTGTGCTGGGAGAGGAGCTGCAGAAGCAATGGCTAAAGAA
GCCAAAAGGAATGAAATGATTTTAAGGTCTTCTGGTTTTGTAAATGTTGA
TAGTTCCAATAACTTTGCCGCAGTTTTCTCCAAGCGAGGCGAAAAAGGAG
TAAATCAAGATTGCGCAATTGTCTGGGAGGAATTTGGATGTCAGGCAGAC
ATGATGTTTTGTGGGATATTTGATGGGCATGGTCCTTGGGGTCATTTTGT
GGCTAAAAAGGTCCGGGAATCAATGCCTTCATCGTTGCTTTGTAATTGGC
AGGAGACTCTTGCTGAAGCTTCTCTTCTCCCAGATATTGACTTGGATTCG
GATAAAAAGACTCATAGATTCAACATATGGAAGCATTCTTATGTTAAGAC
TTGTGCTGCTGTTGATCAAGAGCTTGAGCAGCATCGAAAGATTGATTCAT
TCTACAGCGGAACAACTGCTTTGACAATTGTCAGACAGGGTGAATTCATA
ATGGTTGCTAATGTTGGTGACTCACGAGCTGTATTAGCCACCACTTCAGA
AGATGGAAGCTTGGGTCCAGGTCAGCTAACAGTTGATTTCAAGCCCCACN
NNNCTTATGAAGCTGAGCGGATAATTCAATG
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