CK938452

Overview
NameCK938452
Unique NameCK938452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938452 vs. ExPASy Swiss-Prot
Match: UCP2_RAT (Mitochondrial uncoupling protein 2 OS=Rattus norvegicus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.410e-15
Identity = 58/205 (28.29%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   61 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIV 675
            F+  G A+ +A   T PLD  KVR+Q+QGE+  + +   S +                               G +   + + +TEG  +L++G+ A + RQ  +++ R+GLYD +KQ +T K S    +  +                P DV  VR QA  R    +R  Y+S ++A   + R+EG+  LW+G+S  V R  IV
Sbjct:   17 FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLARTAASAQYR-----------------------------GVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYT-KGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRR--YQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIV 189          
BLAST of CK938452 vs. ExPASy Swiss-Prot
Match: DIC1_YEAST (Mitochondrial dicarboxylate transporter OS=Saccharomyces cerevisiae GN=DIC1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.410e-15
Identity = 65/205 (31.71%), Postives = 90/205 (43.90%), Query Frame = 1
Query:   70 GGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQE-GVASLWRGSSLTVNRAMIVTA 681
            GG A I A   THPLDL KVR+Q      A P    +L   L                                    I   EGV  L+SG+SA VLRQ  Y+T R G YD+LK+    ++     ++                 N ADV  +RMQ D  L +A+RRNYK+ ID + ++ R E G+ +L+ G    + R +++TA
Sbjct:   20 GGAAGIFATMVTHPLDLAKVRLQ------AAPMPKPTLFRMLE----------------------------------SILANEGVVGLYSGLSAAVLRQCTYTTVRFGAYDLLKENVIPRE-QLTNMAYLLPCSMFSGAIGGLAGNFADVVNIRMQNDSALEAAKRRNYKNAIDGVYKIYRYEGGLKTLFTGWKPNMVRGILMTA 183          
BLAST of CK938452 vs. ExPASy Swiss-Prot
Match: UCP2_MOUSE (Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15
Identity = 58/205 (28.29%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   61 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIV 675
            F+  G A+ +A   T PLD  KVR+Q+QGE+  + +   S +                               G +   + + +TEG  +L++G+ A + RQ  +++ R+GLYD +KQ +T K S    +  +                P DV  VR QA  R    +R  Y+S ++A   + R+EG+  LW+G+S  V R  IV
Sbjct:   17 FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYR-----------------------------GVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYT-KGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRR--YQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIV 189          
BLAST of CK938452 vs. ExPASy Swiss-Prot
Match: UCP2_BOVIN (Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15
Identity = 60/205 (29.27%), Postives = 91/205 (44.39%), Query Frame = 1
Query:   61 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIV 675
            F+  G A+ +A   T PLD  KVR+Q+QGE     Q   S +                               G +   + + +TEG  +L+SG+ A + RQ  +++ R+GLYD +KQ +T K S    +  +                P DV  VR QA  R  + +R  Y+S ++A   + R+EG   LW+G+S  V R  IV
Sbjct:   17 FLGAGTAACIADLITFPLDTAKVRLQIQGERQGPMQAAASAQYR-----------------------------GVLGTILTMVRTEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYT-KGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGAGRR--YQSTVEAYKTIAREEGFRGLWKGTSPNVARNAIV 189          
BLAST of CK938452 vs. ExPASy Swiss-Prot
Match: DIC1_CANGA (Mitochondrial dicarboxylate transporter OS=Candida glabrata GN=DIC1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15
Identity = 63/205 (30.73%), Postives = 90/205 (43.90%), Query Frame = 1
Query:   70 GGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLW-RGSSLTVNRAMIVTA 681
            GG A I A  +THPLDL KVR  LQ   +  P  V  LR                                       I + EG+  L++G+SA++LRQ  Y+T R G+YD LK+    +D     +                  N AD+  +RMQ D  LP  +RRNYK+ ID + ++ + EG  SL+  G    + R +++TA
Sbjct:   13 GGAAGIFAVMNTHPLDLTKVR--LQAAPIPKPTIVQMLR--------------------------------------SILKNEGIVGLYAGLSASLLRQCTYTTARFGMYDALKEHVIPRD-KLTNMWYLLGASMVSGALGGLAGNFADLINIRMQNDSALPLDKRRNYKNAIDGMVKIYKAEGAKSLFLTGWKPNMVRGVLMTA 176          
BLAST of CK938452 vs. ExPASy Swiss-Prot
Match: UCP2_HUMAN (Mitochondrial uncoupling protein 2 OS=Homo sapiens GN=UCP2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.111e-15
Identity = 59/205 (28.78%), Postives = 91/205 (44.39%), Query Frame = 1
Query:   61 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIV 675
            F+  G A+ +A   T PLD  KVR+Q+QGE+                               P  A       G +   + + +TEG  +L++G+ A + RQ  +++ R+GLYD +KQ +T K S   ++  +                P DV  VR QA  R    +R  Y+S ++A   + R+EG   LW+G+S  V R  IV
Sbjct:   17 FLGAGTAACIADLITFPLDTAKVRLQIQGESQG-----------------------------PVRATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYT-KGSEHASIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRR--YQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIV 189          
BLAST of CK938452 vs. ExPASy Swiss-Prot
Match: UCP2_PIG (Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14
Identity = 58/205 (28.29%), Postives = 88/205 (42.93%), Query Frame = 1
Query:   61 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIV 675
            F+  G A+ +A   T PLD  KVR+Q+QGE                                P  A       G +   + + + EG  +L++G+ A + RQ  +++ R+GLYD +K  +T K S    +  +                P DV  VR QA  R    +R  Y+S +DA   + R+EG+  LW+G+S  V R  IV
Sbjct:   17 FLGAGTAACIADLITFPLDTAKVRLQIQGERRG-----------------------------PVQAAASAQYRGVLGTILTMVRNEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKHFYT-KGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRR--YRSTVDAYKTIAREEGLRGLWKGTSPNVARNAIV 189          
BLAST of CK938452 vs. ExPASy Swiss-Prot
Match: UCP2_DANRE (Mitochondrial uncoupling protein 2 OS=Danio rerio GN=ucp2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14
Identity = 59/205 (28.78%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   61 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIV 675
            F+  G A+ +A   T PLD  KVR+Q+QGEN A                         S ++     +     G IS  V++   EG  +L+SG+ A + RQ  +++ R+GLYD +KQ +T K S+   +  +                P DV  VR QA  ++ +   + Y S +DA   + ++EG   LW+G+   + R  IV
Sbjct:   17 FIGAGTAACIADLFTFPLDTAKVRLQIQGENKA-------------------------STNMGRGPVKYRGVFGTISTMVRV---EGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYT-KGSDHAGIGSRLMAGCTTGAMAVAVAQPTDVLKVRFQA--QVSAGASKRYHSTMDAYRTIAKEEGFRGLWKGTGPNITRNAIV 190          
BLAST of CK938452 vs. ExPASy Swiss-Prot
Match: UCP2_CYPCA (Mitochondrial uncoupling protein 2 OS=Cyprinus carpio GN=ucp2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14
Identity = 59/205 (28.78%), Postives = 91/205 (44.39%), Query Frame = 1
Query:   61 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIV 675
            F+  G A+ +A   T PLD  KVR+Q+QGE+                        P N+ H P     +    G IS  V++   EG  +L+SG+ A + RQ  +++ R+GLYD +KQ +T K S  + +  +                P DV  VR QA     +   + Y   +DA   + ++EG   LW+G+   + R  IV
Sbjct:   17 FIGAGTAACIADLFTFPLDTAKVRLQIQGESK----------------------IPVNTGHGPVKYRGV---FGTISTMVRV---EGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYT-KGSEHVGIGSRLMAGCTTGAMAVALAQPTDVVKVRFQAQN--SAGANKRYHGTMDAYRTIAKEEGFRGLWKGTGPNITRNAIV 190          
BLAST of CK938452 vs. ExPASy Swiss-Prot
Match: UCP3_PIG (Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14
Identity = 54/201 (26.87%), Postives = 83/201 (41.29%), Query Frame = 1
Query:   73 GIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIV 675
            G A+  A   T PLD  KVR+Q+QGEN A     +                                  G +   + + + EG  + ++G+ A + RQ  +++ R+GLYD +KQ +T K S+  +++ +                P DV  VR QA         R Y   +DA   + R+EGV  LW+G    + R  IV
Sbjct:   21 GTAACFADLLTFPLDTAKVRLQIQGENQAARSAQYR---------------------------------GVLGTILTMVRNEGPRSPYNGLVAGLQRQMSFASIRIGLYDSVKQLYTPKGSDHSSITTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHAGPRSNRKYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIV 188          
The following BLAST results are available for this feature:
BLAST of CK938452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
UCP2_RAT2.410e-1528.29Mitochondrial uncoupling protein 2 OS=Rattus norve... [more]
DIC1_YEAST2.410e-1531.71Mitochondrial dicarboxylate transporter OS=Sacchar... [more]
UCP2_MOUSE3.148e-1528.29Mitochondrial uncoupling protein 2 OS=Mus musculus... [more]
UCP2_BOVIN3.148e-1529.27Mitochondrial uncoupling protein 2 OS=Bos taurus G... [more]
DIC1_CANGA3.148e-1530.73Mitochondrial dicarboxylate transporter OS=Candida... [more]
UCP2_HUMAN4.111e-1528.78Mitochondrial uncoupling protein 2 OS=Homo sapiens... [more]
UCP2_PIG2.041e-1428.29Mitochondrial uncoupling protein 2 OS=Sus scrofa G... [more]
UCP2_DANRE3.481e-1428.78Mitochondrial uncoupling protein 2 OS=Danio rerio ... [more]
UCP2_CYPCA3.481e-1428.78Mitochondrial uncoupling protein 2 OS=Cyprinus car... [more]
UCP3_PIG4.546e-1426.87Mitochondrial uncoupling protein 3 OS=Sus scrofa G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004442_E06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938452 ID=CK938452; Name=CK938452; organism=Citrus sinensis; type=EST; length=681bp
TTTTTTTTTTTTAATTATTATTATTATTATTGTTATTTTTAAATCATGGG
TGTTAAAGGATTTGTTGAGGGCGGAATTGCTTCAATTGTAGCTGGCTGCT
CTACACATCCTCTCGATCTAATTAAAGTTCGCATGCAACTCCAAGGCGAA
AACGTCGCCGTTCCCCAGCAAGTCCACTCTCTCCGTCCGGCTCTGCCTTT
TCATTCCAACTCAGCCACCGTCTTTCCCTCTAATTCCATCCATATCCCCA
CCACCGCACCAGAGCTGCCGCCACGTGTCGGTCCTATCTCCGTCGGAGTC
AAGATCTTTCAAACCGAAGGCGTCGCCGCTTTGTTCTCTGGCGTTTCCGC
CACCGTGCTGAGACAAACGTTGTACTCCACCACTCGCATGGGGCTTTACG
ATGTGCTCAAACAAAAGTGGACTGACAAAGACTCCAACCGCATGACGTTG
AGCCGCAAAGTAGCGGCCGGTTTGATCGCCGGAGCAGTTGGGGCCACCGT
TGGCAACCCCGCTGACGTGGCAATGGTCCGCATGCAAGCCGACGGCCGCC
TCCCATCGGCTCAGCGGCGTAACTACAAGAGCGTAATCGACGCGATCGCG
CAAATGTTGAGGCAAGAGGGGGTCGCCAGTCTTTGGCGCGGGTCATCGCT
GACGGTGAACCGGGCGATGATCGTGACGGCG
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