CK938451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_EMIHU (Photosystem I P700 chlorophyll a apoprotein A2 OS=Emiliania huxleyi GN=psaB PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 3.513e-52 Identity = 91/107 (85.05%), Postives = 102/107 (95.33%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKF 328 NSS LINGYN FGMN+ +VWAWMFLFGHL+WATGFMFLISWRGYWQELIETL WAHERTP+ANL++WRDKPVALSIVQARLVGLAHF+VG+IFT+A F+IAST+GKF Sbjct: 627 NSSPLINGYNAFGMNAQAVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPIANLVKWRDKPVALSIVQARLVGLAHFTVGFIFTFAPFVIASTTGKF 733
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_SELUN (Photosystem I P700 chlorophyll a apoprotein A2 OS=Selaginella uncinata GN=psaB PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 7.825e-52 Identity = 98/108 (90.74%), Postives = 100/108 (92.59%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSSQLINGYNPFG NSLSVWAWMF FGHLVWATGFMFLI RGYWQELIETLA AHERTPLANL+RW DKPVALSIVQARLVGLAHFSVGYIFTYAAF I ST+GKFG Sbjct: 627 NSSQLINGYNPFGTNSLSVWAWMFSFGHLVWATGFMFLIPRRGYWQELIETLARAHERTPLANLVRWGDKPVALSIVQARLVGLAHFSVGYIFTYAAFPIPSTAGKFG 734
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_PROMT (Photosystem I P700 chlorophyll a apoprotein A2 OS=Prochlorococcus marinus (strain NATL2A) GN=psaB PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.022e-51 Identity = 91/108 (84.26%), Postives = 100/108 (92.59%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSSQLINGYNPFG+N+LS WAWMFLFGHL+WATGFMFLISWRGYWQELIETL WAH+RTP+ANL+ WRDKPVALSIVQARLVGL HF+VG T+ AF+IASTSGKFG Sbjct: 635 NSSQLINGYNPFGVNALSPWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHQRTPIANLVGWRDKPVALSIVQARLVGLTHFTVGNFVTFGAFVIASTSGKFG 742
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_PROMA (Photosystem I P700 chlorophyll a apoprotein A2 OS=Prochlorococcus marinus GN=psaB PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.022e-51 Identity = 91/108 (84.26%), Postives = 100/108 (92.59%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSSQLINGYNPFG+N+LS WAWMFLFGHL+WATGFMFLISWRGYWQELIETL WAH+RTP+ANL+ WRDKPVALSIVQARLVGL HF+VG T+ AF+IASTSGKFG Sbjct: 640 NSSQLINGYNPFGVNALSPWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHQRTPIANLVGWRDKPVALSIVQARLVGLTHFTVGNFVTFGAFVIASTSGKFG 747
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_PROM1 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Prochlorococcus marinus (strain NATL1A) GN=psaB PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.022e-51 Identity = 91/108 (84.26%), Postives = 100/108 (92.59%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSSQLINGYNPFG+N+LS WAWMFLFGHL+WATGFMFLISWRGYWQELIETL WAH+RTP+ANL+ WRDKPVALSIVQARLVGL HF+VG T+ AF+IASTSGKFG Sbjct: 635 NSSQLINGYNPFGVNALSPWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHQRTPIANLVGWRDKPVALSIVQARLVGLTHFTVGNFVTFGAFVIASTSGKFG 742
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_OLTVI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Oltmannsiellopsis viridis GN=psaB PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 2.517e-50 Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSSQLINGYNP GMNSL VW+W FL HL++ATGFMFLISWRGYWQELIETL W+HERTPLA+L+RWRDKPVALSIVQARLVGL HFSVGY+ TY +FLIASTS KFG Sbjct: 627 NSSQLINGYNPNGMNSLGVWSWAFLLAHLIYATGFMFLISWRGYWQELIETLVWSHERTPLASLVRWRDKPVALSIVQARLVGLVHFSVGYVLTYGSFLIASTSSKFG 734
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_PROMM (Photosystem I P700 chlorophyll a apoprotein A2 OS=Prochlorococcus marinus (strain MIT 9313) GN=psaB PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 4.748e-49 Identity = 87/108 (80.56%), Postives = 100/108 (92.59%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSSQ+INGYNPFG+N+LS WA+MFL GHLVWATGFMFLISWRGYWQELIETL WAH+R+P+ANL+ WRDKPVALSIVQARLVG+ HF+VG IFT+ AF+IAST+ KFG Sbjct: 642 NSSQIINGYNPFGINNLSPWAYMFLAGHLVWATGFMFLISWRGYWQELIETLVWAHQRSPIANLVGWRDKPVALSIVQARLVGVTHFAVGNIFTFGAFVIASTASKFG 749
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_PROM3 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Prochlorococcus marinus (strain MIT 9303) GN=psaB PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 4.748e-49 Identity = 87/108 (80.56%), Postives = 100/108 (92.59%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSSQ+INGYNPFG+N+LS WA+MFL GHLVWATGFMFLISWRGYWQELIETL WAH+R+P+ANL+ WRDKPVALSIVQARLVG+ HF+VG IFT+ AF+IAST+ KFG Sbjct: 642 NSSQIINGYNPFGINNLSPWAYMFLAGHLVWATGFMFLISWRGYWQELIETLVWAHQRSPIANLVGWRDKPVALSIVQARLVGVTHFAVGNIFTFGAFVIASTASKFG 749
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_GLOVI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Gloeobacter violaceus GN=psaB PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 5.249e-48 Identity = 87/108 (80.56%), Postives = 98/108 (90.74%), Query Frame = 2 Query: 8 NSSQLINGYNPFG-MNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKF 328 NS+ LI GY+P G N+LSVWAWMFLFGHLVWATGFMFLI+WRGYWQELIETL WAHERTPLANL+RW+DKPVA+SIVQ RLVGLAHF++GYI TYAAFLIAST+ + Sbjct: 609 NSAPLIGGYSPSGGTNALSVWAWMFLFGHLVWATGFMFLIAWRGYWQELIETLVWAHERTPLANLVRWKDKPVAMSIVQGRLVGLAHFTIGYILTYAAFLIASTAALY 716
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_BIGNA (Photosystem I P700 chlorophyll a apoprotein A2 OS=Bigelowiella natans GN=psaB PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 7.580e-47 Identity = 86/107 (80.37%), Postives = 96/107 (89.72%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKF 328 NSSQLINGYNP GMN+LSVW+WMFLFGHL++ATGFMFLISWRGYWQELIETL WAH+R P ++ W +KPVAL+IVQAR VGL HF+VGYI TYAAFLIASTSGKF Sbjct: 631 NSSQLINGYNPLGMNALSVWSWMFLFGHLIYATGFMFLISWRGYWQELIETLVWAHDRLP---IVLWPEKPVALTIVQARFVGLIHFTVGYILTYAAFLIASTSGKF 734 The following BLAST results are available for this feature:
BLAST of CK938451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938451 ID=CK938451; Name=CK938451; organism=Citrus sinensis; type=EST; length=549bpback to top |