CK938451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_HETTR (Photosystem I P700 chlorophyll a apoprotein A2 OS=Heterocapsa triquetra GN=psaB PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.770e-33 Identity = 67/108 (62.04%), Postives = 80/108 (74.07%), Query Frame = 2 Query: 5 FNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRD---KPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTS 319 FNS LI GY+ G N LSVWAW+FL HL WATGFMFLISWRGYWQELI+ + + H +TP+ I W PVALSIVQAR +GL HF+VG+I TYAAF++ ST+ Sbjct: 670 FNSGSLIRGYDALGANDLSVWAWIFLAAHLCWATGFMFLISWRGYWQELIDIILYMHLKTPILYDI-WNAGVYTPVALSIVQARFIGLVHFAVGFIITYAAFIVGSTT 776
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_AMPCA (Photosystem I P700 chlorophyll a apoprotein A2 OS=Amphidinium carterae GN=psaB PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 9.308e-29 Identity = 59/106 (55.66%), Postives = 75/106 (70.75%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRD--KPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTS 319 N + L++GY+ G N L+VWAW FL HL WATGFMFLISWRGYWQELI+T+ + H + + D PVALSIVQAR +GLAH+ G+I TY AF++ +TS Sbjct: 539 NCAALLSGYDSLGSNDLAVWAWAFLLAHLAWATGFMFLISWRGYWQELIDTVIYMHLKAQARFIGLAADVVTPVALSIVQARFIGLAHYVAGFILTYHAFVVGATS 644
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_SYNP2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=psaA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.141e-18 Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 SSQ+IN Y ++LS + MFL GH V+A MFL S RGYWQELIE++ WAH + LA I +P ALSIVQ R VG+AH+ +G I T AF +A Sbjct: 642 SSQVINSYG----SALSAYGIMFLAGHFVFAFSLMFLFSGRGYWQELIESIVWAHNKLKLAPAI----QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLA 733
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_PINTH (Photosystem I P700 chlorophyll a apoprotein A1 OS=Pinus thunbergii GN=psaA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.655e-18 Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 +SQ+I Y +SLS + +FL H VWA MFL S RGYWQELIE++ WAH + +A I +P ALSIVQ R VG+AH+ +G I T AF +A Sbjct: 656 ASQVIQSYG----SSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI----QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLA 747
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_PINKO (Photosystem I P700 chlorophyll a apoprotein A1 OS=Pinus koraiensis GN=psaA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.655e-18 Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 +SQ+I Y +SLS + +FL H VWA MFL S RGYWQELIE++ WAH + +A I +P ALSIVQ R VG+AH+ +G I T AF +A Sbjct: 653 ASQVIQSYG----SSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI----QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLA 744
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_SYNJB (Photosystem I P700 chlorophyll a apoprotein A1 OS=Synechococcus sp. GN=psaA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.261e-17 Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 S Q+IN Y ++LS + +FL H VWA MFL S RGYWQELIE++ WAH + +A I +P ALSI+Q R VG+AH+ +G I T AF +A Sbjct: 658 SVQVINSYG----SALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI----QPRALSIIQGRAVGVAHYLLGGIVTTWAFFLA 749
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_PHYPA (Photosystem I P700 chlorophyll a apoprotein A1 OS=Physcomitrella patens GN=psaA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.261e-17 Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 +SQ+I Y +SLS + +FL H VWA MFL S RGYWQELIE++ WAH + +A I +P ALSIVQ R VG+AH+ +G I T AF +A Sbjct: 653 ASQVIQSYG----SSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI----QPRALSIVQGRAVGVAHYLLGGIATTWAFFLA 744
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_ANGEV (Photosystem I P700 chlorophyll a apoprotein A1 OS=Angiopteris evecta GN=psaA PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.261e-17 Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 +SQ+I Y +SLS + +FL H VWA MFL S RGYWQELIE++ WAH + +A I +P ALSIVQ R VG+AH+ +G I T AF +A Sbjct: 653 ASQVIQSYG----SSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI----QPRALSIVQGRAVGVAHYLLGGIATTWAFFLA 744
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_SYNJA (Photosystem I P700 chlorophyll a apoprotein A1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=psaA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.647e-17 Identity = 48/100 (48.00%), Postives = 62/100 (62.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 S Q+IN Y + LS + +FL H VWA MFL S RGYWQELIE++ WAH + +A I +P ALSI+Q R VG+AH+ +G I T AF +A Sbjct: 658 SVQVINSYG----SELSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI----QPRALSIIQGRAVGVAHYLLGGIVTTWAFFLA 749
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_PSINU (Photosystem I P700 chlorophyll a apoprotein A1 OS=Psilotum nudum GN=psaA PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.647e-17 Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 +SQ+I Y +SLS + +FL H VWA MFL S RGYWQELIE++ WAH + +A I +P ALSIVQ R VG+AH+ +G I T AF +A Sbjct: 653 ASQVIQSYG----SSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIIWAHNKLKVAPAI----QPRALSIVQGRAVGVAHYLLGGIATTWAFFLA 744 The following BLAST results are available for this feature:
BLAST of CK938451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938451 ID=CK938451; Name=CK938451; organism=Citrus sinensis; type=EST; length=549bpback to top |