CK938451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_PROM5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Prochlorococcus marinus (strain MIT 9515) GN=psaA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.298e-16 Identity = 46/104 (44.23%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSG 322 ++Q++ Y S+S++ MFL H +WA MFL S RGYWQEL E++ WAH + +A I +P ALSI Q R VG+ HF VG I T AF A G Sbjct: 663 AAQVLTSYG----QSISMYGLMFLGAHFIWAFSLMFLFSGRGYWQELFESIVWAHNKLKVAPTI----QPRALSITQGRAVGVTHFLVGGIATTWAFFHARLFG 758
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_PHATR (Photosystem I P700 chlorophyll a apoprotein A1 OS=Phaeodactylum tricornutum GN=psaA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.298e-16 Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 +SQ+I Y ++ S + +FL H +WA MFL S RGYWQELIE++ WAH + A I +P ALSI Q R VGLAH+ +G I T AF +A Sbjct: 655 ASQVIQSYG----SAASAYGLIFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLNFAPAI----QPRALSITQGRAVGLAHYLLGGIGTTWAFFLA 746
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_THAPS (Photosystem I P700 chlorophyll a apoprotein A1 OS=Thalassiosira pseudonana GN=psaA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.919e-16 Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 +SQ+I Y ++ S + +FL H +WA MFL S RGYWQELIE++ WAH + A I +P ALSI Q R VGLAH+ +G I T AF +A Sbjct: 655 ASQVIQSYG----SASSAYGLIFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLNFAPTI----QPRALSITQGRAVGLAHYLLGGIGTTWAFFLA 746
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_CYAPA (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cyanophora paradoxa GN=psaA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.919e-16 Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 +SQ+I Y ++LS + MFL H +WA MFL S RGYWQELIE++ WAH + A I +P ALSI Q R VG+AH+ +G I T +F A Sbjct: 655 ASQVIQSYG----SALSAYGLMFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKFAPSI----QPRALSITQGRAVGVAHYLLGGIATTWSFFHA 746
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_ODOSI (Photosystem I P700 chlorophyll a apoprotein A1 OS=Odontella sinensis GN=psaA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 +SQ+I Y ++ S + +FL H +WA MFL S RGYWQELIE++ WAH + A I +P ALSI Q R VGLAH+ +G I T +F +A Sbjct: 655 ASQVIQSYG----SASSAYGLIFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLNFAPAI----QPRALSITQGRAVGLAHYLLGGIGTTWSFFLA 746
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_ENCLE (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Encephalartos lebomboensis GN=psaA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHF 268 +SQ+I Y +SLS + +FL H VWA MFL S RGYWQELIE++ WAH + +A +I +P ALSIVQ R VG+AH+ Sbjct: 642 ASQVIQSYG----SSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLEVAPVI----QPRALSIVQGRAVGVAHY 719
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_SYNSC (Photosystem I P700 chlorophyll a apoprotein A1 OS=Synechococcus sp. (strain CC9605) GN=psaA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.434e-15 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 14 SQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIA 310 +Q + N +G N+ + + MFL H V+A MFL S RGYWQELIE++ WAH + +A I +P ALSI+Q R VG+AH+ +G I T AF A Sbjct: 668 AQAVQVINSYGSNT-AAYGIMFLGAHFVFAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI----QPRALSIIQGRAVGVAHYLLGGIATTWAFFHA 761
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_GINBI (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Ginkgo biloba GN=psaA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.485e-15 Identity = 43/86 (50.00%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHF 268 +SQ+I Y +SLS + FL H VWA MFL S RGYWQELIE++ WAH + +A I +P ALSIVQ R VG+AH+ Sbjct: 644 ASQVIQSYG----SSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI----QPRALSIVQGRAVGVAHY 721
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_SEQSE (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Sequoia sempervirens GN=psaA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.858e-15 Identity = 43/85 (50.59%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAH 265 +SQ+I Y +SLS + +FL H VWA MFL S RGYWQELIE++ WAH + +A I +P ALSIVQ R VG+AH Sbjct: 644 ASQVIQSYG----SSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI----QPRALSIVQGRAVGVAH 720
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAA_ARAAA (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Araucaria araucana GN=psaA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.858e-15 Identity = 43/85 (50.59%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 11 SSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAH 265 +SQ+I Y +SLS + +FL H VWA MFL S RGYWQELIE++ WAH + +A I +P ALSIVQ R VG+AH Sbjct: 640 ASQVIQSYG----SSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI----QPRALSIVQGRAVGVAH 716 The following BLAST results are available for this feature:
BLAST of CK938451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938451 ID=CK938451; Name=CK938451; organism=Citrus sinensis; type=EST; length=549bpback to top |