CK938451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_THEEB (Photosystem I P700 chlorophyll a apoprotein A2 OS=Thermosynechococcus elongatus (strain BP-1) GN=psaB PE=1 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 5.237e-56 Identity = 100/108 (92.59%), Postives = 104/108 (96.30%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSSQLINGYNPFG N+LSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETL WAHERTPLANL+RW+DKPVALSIVQARLVGLAHFSVGYI TYAAFLIAST+ KFG Sbjct: 634 NSSQLINGYNPFGTNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSIVQARLVGLAHFSVGYILTYAAFLIASTAAKFG 741
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_SYNEN (Photosystem I P700 chlorophyll a apoprotein A2 OS=Synechococcus elongatus naegeli GN=psaB PE=3 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 5.237e-56 Identity = 100/108 (92.59%), Postives = 104/108 (96.30%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSSQLINGYNPFG N+LSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETL WAHERTPLANL+RW+DKPVALSIVQARLVGLAHFSVGYI TYAAFLIAST+ KFG Sbjct: 634 NSSQLINGYNPFGTNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSIVQARLVGLAHFSVGYILTYAAFLIASTAAKFG 741
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_PORYE (Photosystem I P700 chlorophyll a apoprotein A2 OS=Porphyra yezoensis GN=psaB PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 6.840e-56 Identity = 98/108 (90.74%), Postives = 106/108 (98.15%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSS LINGYNP+GMN+LSVW+WMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRW+DKPVALSIVQARLVGLAHFSVGY+ TYAAF++AST+GKFG Sbjct: 627 NSSPLINGYNPYGMNNLSVWSWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWKDKPVALSIVQARLVGLAHFSVGYVLTYAAFVLASTAGKFG 734
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_MASLA (Photosystem I P700 chlorophyll a apoprotein A2 OS=Mastigocladus laminosus GN=psaB PE=3 SV=3) HSP 1 Score: 216.083 bits (549), Expect = 8.933e-56 Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NS+QLINGYNP+GMN+LSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETL WAHERTPLANL+RW+DKPVALSIVQARLVGL HF+VGY+ TYAAFLIAST+GKFG Sbjct: 636 NSAQLINGYNPYGMNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSIVQARLVGLTHFTVGYVLTYAAFLIASTAGKFG 743
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_SYNP2 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=psaB PE=3 SV=4) HSP 1 Score: 215.698 bits (548), Expect = 1.167e-55 Identity = 96/108 (88.89%), Postives = 106/108 (98.15%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NS+QLINGYNP+G+N+LSVWAWMFLFGHLVWATGFMFLISWRGYWQELIET+ WAHERTPLAN++RW+DKPVALSIVQARLVGLAHF+VGY+ TYAAFLIASTSGKFG Sbjct: 626 NSAQLINGYNPYGVNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETIVWAHERTPLANIVRWKDKPVALSIVQARLVGLAHFTVGYVLTYAAFLIASTSGKFG 733
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_PORPU (Photosystem I P700 chlorophyll a apoprotein A2 OS=Porphyra purpurea GN=psaB PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.167e-55 Identity = 97/108 (89.81%), Postives = 106/108 (98.15%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSS LINGYNP+GMN+LSVW+WMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRW+DKPVA+SIVQARLVGLAHFSVGY+ TYAAF++AST+GKFG Sbjct: 627 NSSPLINGYNPYGMNNLSVWSWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWKDKPVAMSIVQARLVGLAHFSVGYVLTYAAFVLASTAGKFG 734
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_THAPS (Photosystem I P700 chlorophyll a apoprotein A2 OS=Thalassiosira pseudonana GN=psaB PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.524e-55 Identity = 99/107 (92.52%), Postives = 103/107 (96.26%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKF 328 NSS LINGYNPFGMN+LSVW+WMFLFGHL+WATGFMFLISWRGYWQELIETL WAHERTPLANLIRWRDKPVALSIVQARLVGL HFSVGYI TYAAF+IASTSGKF Sbjct: 626 NSSPLINGYNPFGMNNLSVWSWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLIRWRDKPVALSIVQARLVGLVHFSVGYILTYAAFVIASTSGKF 732
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_SYNY3 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Synechocystis sp. (strain PCC 6803) GN=psaB PE=1 SV=4) HSP 1 Score: 215.312 bits (547), Expect = 1.524e-55 Identity = 96/108 (88.89%), Postives = 106/108 (98.15%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NS+QLINGYNP+G+N+LSVWAWMFLFGHLVWATGFMFLISWRGYWQELIET+ WAHERTPLANL+RW+DKPVALSIVQARLVGLAHF+VGY+ TYAAFLIAST+GKFG Sbjct: 624 NSAQLINGYNPYGVNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETIVWAHERTPLANLVRWKDKPVALSIVQARLVGLAHFTVGYVLTYAAFLIASTAGKFG 731
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_RHDSA (Photosystem I P700 chlorophyll a apoprotein A2 OS=Rhodomonas salina GN=psaB PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.524e-55 Identity = 97/108 (89.81%), Postives = 104/108 (96.30%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG 331 NSS LINGYNPFGMNSLSVW+WMFLFGHL+WATGFMFLISWRGYWQELIETL WAHERTPLANL+RW+DKPVALSIVQARLVGL HF+ GYIFTYAAF+IAST+GKFG Sbjct: 627 NSSPLINGYNPFGMNSLSVWSWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSIVQARLVGLIHFTAGYIFTYAAFVIASTTGKFG 734
BLAST of CK938451 vs. ExPASy Swiss-Prot
Match: PSAB_ODOSI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Odontella sinensis GN=psaB PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.524e-55 Identity = 99/107 (92.52%), Postives = 103/107 (96.26%), Query Frame = 2 Query: 8 NSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKF 328 NSS LINGYNPFGMN+LSVWAWMFLFGHL+WATGFMFLISWRGYWQELIETL WAHERTPLANLIRWRDKPVALSIVQARLVGL HF+VGYI TYAAF+IASTSGKF Sbjct: 626 NSSPLINGYNPFGMNNLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLIRWRDKPVALSIVQARLVGLVHFAVGYILTYAAFVIASTSGKF 732 The following BLAST results are available for this feature:
BLAST of CK938451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938451 ID=CK938451; Name=CK938451; organism=Citrus sinensis; type=EST; length=549bpback to top |