CK938448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938448 vs. ExPASy Swiss-Prot
Match: TRXF2_ARATH (Thioredoxin F-type 2, chloroplastic OS=Arabidopsis thaliana GN=At5g16400 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 34/82 (41.46%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 182 QLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTI 424 ++VV+D WCGPC+ IAP EL++K +++FLK+D + + K +A + + +PTF LK+ K+V +V GAK E+L I Sbjct: 98 KIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLLAAI 179
BLAST of CK938448 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 44/123 (35.77%), Postives = 71/123 (57.72%), Query Frame = 2 Query: 80 PRKAEMAAAEEGQVIGCHTVEAWNEQLQKSN--ETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHL 436 PR++ + AE G V N+ K+ E+ V+VDF A WCGPCR IAP + E+A + + L +K++ DE +VA+++ + ++PT M K GK + ++GA K + QT+ K+L Sbjct: 26 PRRSVVVRAEAGAV---------NDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139
BLAST of CK938448 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 35/91 (38.46%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 173 ETKQLVVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHLA 439 E++ V+VDF A WCGPC+ IAP + ELAK+ + K++ DE +AT + + ++PT +F K G+ + ++GA K L +I K+L+ Sbjct: 90 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
BLAST of CK938448 vs. ExPASy Swiss-Prot
Match: THIO_LISMO (Thioredoxin OS=Listeria monocytogenes GN=trxA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 34/86 (39.53%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 185 LVVVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKHL 436 LV+ DF A+WCGPCR +AP L E+ ++ L +K+DVDE + V ++PT + K+G++V+ ++G + KEEL + I K++ Sbjct: 18 LVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV 103
BLAST of CK938448 vs. ExPASy Swiss-Prot
Match: THIO_LISIN (Thioredoxin OS=Listeria innocua GN=trxA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 34/86 (39.53%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 185 LVVVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKHL 436 LV+ DF A+WCGPCR +AP L E+ ++ L +K+DVDE + V ++PT + K+G++V+ ++G + KEEL + I K++ Sbjct: 18 LVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV 103
BLAST of CK938448 vs. ExPASy Swiss-Prot
Match: THIO_GRIPA (Thioredoxin OS=Griffithsia pacifica GN=trxA PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 176 TKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHL 436 ++Q V+VDF A WCGPCR IA + E+A + L +KV+ D+ ++AT++ + ++PT M GK VD VVGA K L T+ KHL Sbjct: 18 SRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQNPTIATEYGIRSIPTVMIFINGKKVDTVVGAVPKLTLLNTLQKHL 106
BLAST of CK938448 vs. ExPASy Swiss-Prot
Match: TRXF1_ARATH (Thioredoxin F-type 1, chloroplastic OS=Arabidopsis thaliana GN=At3g02730 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 35/91 (38.46%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 179 KQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 448 ++LVV+D WCGPC+ IAP L++K +V+FLK+D + + + +A + + +PTF LK+ K+V +V GAK ++L I + AS Sbjct: 87 EKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETARSAAS 177
BLAST of CK938448 vs. ExPASy Swiss-Prot
Match: TR548_MIMIV (Thioredoxin-like protein R548 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R548 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 32/89 (35.96%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 170 NETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDV--DELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAK 430 +E+K LV++DF +WCGPC+ IAP +A+K P V F K++ + L ++ + ++PTF F K GK + + V A L+++I + Sbjct: 46 DESKGLVIIDFFTTWCGPCKRIAPDYIRMAEKYPTVSFYKINAENENLANIVAACEIVSLPTFCFFKAGKYIGRFVNADPVGLEKSIVE 134
BLAST of CK938448 vs. ExPASy Swiss-Prot
Match: GLRX3_XENTR (Glutaredoxin-3 OS=Xenopus tropicalis GN=glrx3 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 32/93 (34.41%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 170 NETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 448 N K L VV F A W C + +AELAK+ P V+F+K++ + + V+ + V ++PTF+F K + +D++ GA EL + + +H ++ S Sbjct: 19 NSAKSLTVVHFWAPWAPQCTQMNEVMAELAKEQPQVMFVKLEAEAVPEVSEKYEVTSVPTFLFFKNSQKIDRLDGAHAPELTKRVQRHASSTS 111
BLAST of CK938448 vs. ExPASy Swiss-Prot
Match: THIO_PORYE (Thioredoxin OS=Porphyra yezoensis GN=trxA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 31/86 (36.05%), Postives = 57/86 (66.28%), Query Frame = 2 Query: 188 VVVDFTASWCGPCRFIAPFLAELAKKL-PNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHLA 439 V+VDF A WCGPCR ++P + E+A++ ++ +K++ D+ ++A ++ + ++PT M K G+ VD V+GA K L T+ K+++ Sbjct: 22 VLVDFWAPWCGPCRMVSPVVDEIAEEYESSIKVVKINTDDNPTIAAEYGIRSIPTLMIFKAGERVDTVIGAVPKSTLASTLNKYIS 107 The following BLAST results are available for this feature:
BLAST of CK938448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938448 ID=CK938448; Name=CK938448; organism=Citrus sinensis; type=EST; length=709bpback to top |