CK938443

Overview
NameCK938443
Unique NameCK938443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length375
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK938443 vs. ExPASy Swiss-Prot
Match: ATP9_VICFA (ATP synthase subunit 9, mitochondrial OS=Vicia faba GN=ATP9 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.651e-11
Identity = 37/57 (64.91%), Postives = 38/57 (66.67%), Query Frame = 3 
Query:  120 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQLFGYAILGSALTE 290
            MLEGAK +                 NVFSSLIHSVARNPSLAKQLFGYAILG ALTE
Sbjct:    1 MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTE 57
[Close]
BLAST of CK938443 vs. ExPASy Swiss-Prot
Match: ATP9_SOYBN (ATP synthase subunit 9, mitochondrial OS=Glycine max GN=ATP9 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.651e-11
Identity = 37/57 (64.91%), Postives = 38/57 (66.67%), Query Frame = 3 
Query:  120 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQLFGYAILGSALTE 290
            MLEGAK +                 NVFSSLIHSVARNPSLAKQLFGYAILG ALTE
Sbjct:    1 MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTE 57
[Close]
BLAST of CK938443 vs. ExPASy Swiss-Prot
Match: ATP9_PEA (ATP synthase subunit 9, mitochondrial OS=Pisum sativum GN=ATP9 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.651e-11
Identity = 37/57 (64.91%), Postives = 38/57 (66.67%), Query Frame = 3 
Query:  120 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQLFGYAILGSALTE 290
            MLEGAK +                 NVFSSLIHSVARNPSLAKQLFGYAILG ALTE
Sbjct:    1 MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTE 57
[Close]
BLAST of CK938443 vs. ExPASy Swiss-Prot
Match: ATP9_MARPO (ATP synthase subunit 9, mitochondrial OS=Marchantia polymorpha GN=ATP9 PE=3 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.380e-11
Identity = 37/57 (64.91%), Postives = 39/57 (68.42%), Query Frame = 3 
Query:  120 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQLFGYAILGSALTE 290
            MLEGAKL+                 NVFSSLI+SVARNPSLAKQLFGYAILG ALTE
Sbjct:    1 MLEGAKLIGAGAATIALAGAAVGIGNVFSSLINSVARNPSLAKQLFGYAILGFALTE 57
The following BLAST results are available for this feature:
BLAST of CK938443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ATP9_VICFA5.651e-1164.91ATP synthase subunit 9, mitochondrial OS=Vicia fab... [more]
ATP9_SOYBN5.651e-1164.91ATP synthase subunit 9, mitochondrial OS=Glycine m... [more]
ATP9_PEA5.651e-1164.91ATP synthase subunit 9, mitochondrial OS=Pisum sat... [more]
ATP9_MARPO7.380e-1164.91ATP synthase subunit 9, mitochondrial OS=Marchanti... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004442_F06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938443 ID=CK938443; Name=CK938443; organism=Citrus sinensis; type=EST; length=375bp
GGGGACGTGGGCAAACCAAGTACGATGCCCAAGAGAAAAGGAACGAGGGG
AAGAATCGACGAGAAATCCATAACAAAAAATCGTGAATGAAAAAGCGTGA
CGAGAATTCTCAACCCGAGATGTTAGAAGGTGCAAAATTAATGGGTGCCG
GAGCTGCTACAATTGCTTTAGCGGGAGCTGCTGTCGGTATTGGAAACGTG
TTCAGTTCTTTGATCCATTCCGTGGCACGAAATCCATCATTGGCTAAACA
ATTATTTGGTTATGCCATTTTGGGCTCTGCTCTAACCGAAGCTATTGCAT
TGTTTGCCCTAATGATGGCCTTTTTGATCTTATTCGTCTTCTGATTCAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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