CK938438

Overview
NameCK938438
Unique NameCK938438
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:21..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938438 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 200.29 bits (508), Expect = 1.147e-50
Identity = 100/167 (59.88%), Postives = 118/167 (70.66%), Query Frame = 2
Query:  164 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQSFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 664
            ++VYFDVE  G+P GR+V  L+   VPKTAENFRALCTGEKG G       Y GS FHR+IP FMLQ            +SIYG KFPDENFK  H  PGLLSMANAGP+TNGSQ FITTV   WLDG+HVVFG+V+ G D+V KVE+ G  +G  K+++V+A SGE
Sbjct:    2 SQVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSGATKARIVVAKSGE 161          
BLAST of CK938438 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.147e-50
Identity = 102/174 (58.62%), Postives = 123/174 (70.69%), Query Frame = 2
Query:  155 EITNKVYFDVEIA---GKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQSFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVIADSGE 664
            +IT+KVYFD+ +    GK AGRIV+GL+G  VP+T ENFRALCTGEKG G       YKGSTFHR+I  FM+Q            +S+YG  F DENFKL H GPG+LSMANAGP+TNGSQ FI T+ TSWLDGRHVVFG+V+ GM+VV  +E +    G  P+ KVVIAD G+
Sbjct:   87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQ 253          
BLAST of CK938438 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.498e-50
Identity = 101/167 (60.48%), Postives = 118/167 (70.66%), Query Frame = 2
Query:  167 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQSFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVIADSGE 664
            +VYFD+ I GK  GRI M L+   VPKTA+NFR+LCTGEKGIGKSGKPLHYKGS FHR+I  FM+Q            ESIYG KF DE F +KH  P LLSMANAGP+TNGSQ FITTV T  LDG+HVVFG+VL+G  VV ++E    Q+G  P  + +I D GE
Sbjct:   12 RVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGE 178          
BLAST of CK938438 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.498e-50
Identity = 98/166 (59.04%), Postives = 114/166 (68.67%), Query Frame = 2
Query:  167 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQSFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 664
            KV+FD+ + G+ +GR+   LF   VPKTAENFRALCTGEKG G SGKPLHYK S FHRIIP FM Q            ESIYG  F DENF LKH G GLLSMANAGP+TNGSQ FIT V T WLDG H VFG+++ G  V+  +E  G ++G P +K+ I D GE
Sbjct:    8 KVFFDIAVNGQHSGRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQIVDGSKVLDLLEQHGSRSGMPSAKIEITDCGE 173          
BLAST of CK938438 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.957e-50
Identity = 99/166 (59.64%), Postives = 116/166 (69.88%), Query Frame = 2
Query:  167 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQSFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 664
            +V+FD+   G+P GRIVM L    VPKTAENFRALCTGEKG G       YKGS FHR+IP+FM Q            +SIYG KF DENF+LKHTGPG+L MANAGP+TNGSQ FITT  TSWLD RHVVFG V+ GMDVV K+E+ G Q+G    K+ + D G+
Sbjct:    5 RVFFDMSADGQPVGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESLGSQSGKTNKKIAVVDCGQ 163          
BLAST of CK938438 vs. ExPASy Swiss-Prot
Match: PPIF_RAT (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Rattus norvegicus GN=Ppif PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 3.338e-50
Identity = 98/165 (59.39%), Postives = 115/165 (69.70%), Query Frame = 2
Query:  170 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQSFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 664
            VY DV   G+P GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP+FM Q            +SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQ FI T+ T WLDG+HVVFG V  GMDVV K+E+ G ++G    K+VI D G+
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQ 204          
BLAST of CK938438 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.338e-50
Identity = 106/191 (55.50%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   98 VLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQSFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE--AEGRQNGTPKSKVVIADSGE 664
            VL    + + A+ +     +IT+KV+FD+E   KP GR+V+GL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+Q            +SIYGEKF DENFKL+HT  GLLSMANAG DTNGSQ FITTV T WLDGRHVVFG+VL G ++V ++E   +GR +  P   V I  SGE
Sbjct:   13 VLAVGLALVHAEDAQPRGPKITSKVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENVPKGRSD-RPVETVKIVKSGE 195          
BLAST of CK938438 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.360e-50
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = 2
Query:  170 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQSFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 664
            VY DV   G+P GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP+FM Q             SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQ FI T+ T WLDG+HVVFG V  GMDVV K+E+ G ++G    K+VI D G+
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQ 204          
BLAST of CK938438 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 102/171 (59.65%), Postives = 119/171 (69.59%), Query Frame = 2
Query:  155 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQSFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA-EGRQNGTPKSKVVIADSGE 664
            ++T KVYFD++I  +  GR+V GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQ FITTV TSWLDG+HVVFGKVL GMDVV KVE+ +      P   V+I DSG+
Sbjct:   41 KVTVKVYFDLQIGDESVGRVVFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVESTKTDSRDKPLKDVIIVDSGK 204          
BLAST of CK938438 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 101/163 (61.96%), Postives = 114/163 (69.94%), Query Frame = 2
Query:  173 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQSFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSG 661
            +FDV   G+P GRIV  LF   VPKTA NFRALCTGEKG G       Y GSTFHR+IP FMLQ            +SIYGEKFPDENF LKH  PGLLSMANAGP+TNGSQ FITTV T WLDG+HVVFG+V  GMDVV KVE+ G  +G  ++++VI   G
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCG 160          
The following BLAST results are available for this feature:
BLAST of CK938438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
CYPH_YEAST1.147e-5059.88Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CP20B_ARATH1.147e-5058.62Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPID_GIBZE1.498e-5060.48Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
CYP6_RHIOR1.498e-5059.04Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
PPIA_BLAGE1.957e-5059.64Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIF_RAT3.338e-5059.39Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_ASPNG3.338e-5055.50Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIF_MOUSE4.360e-5059.39Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_MOUSE5.694e-5059.65Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
CYPH_SCHPO5.694e-5061.96Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004442_H01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938438 ID=CK938438; Name=CK938438; organism=Citrus sinensis; type=EST; length=851bp
GGGGGGAACCCCAAAGCGATTGACTGCGAAAAGAGAAACAACGAAGTGNN
NNATGGCTTCGACAAATTTGCTTCCACTCACGATGCTATGGGCTGTTGTC
CTGTTGGCCACTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTT
GAAAGAAATCACAAACAAAGTTTACTTTGACGTTGAGATTGCCGGAAAAC
CTGCCGGACGTATTGTGATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACT
GCAGAAAATTTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAG
TGGGAAGCCACTCCACTACAAGGGAAGTACGTTTCATAGGATTATTCCCA
GCTTTATGCTTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGA
GAGTCAATTTATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCA
CACCGGCCCAGGGCTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATG
GTTCACAATCCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGG
CATGTTGTATTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGT
TGAAGCTGAAGGGAGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCATTG
CAGACAGCGGTGAACTTCCTCTGTGATTTCCCCCATAATTATATAATTAC
GCTATACACCTTTTTAATCCTCTCGTCTTTTCAACCTTCATGAAGATACT
CTTAATTTGCCTATTTATCATGTAATAGACATTTTAAAATGTCCTAGGTT
GTTTGCCAAGTTGGTGCTTCATTTTAAGGGGATCCTTTTCTCTGAAAAAA
C
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