CK938436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 56/145 (38.62%), Postives = 78/145 (53.79%), Query Frame = 2 Query: 209 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG*T 643 + KE+ L DPP P ED+ +I GP +PYAGGVF + + D+P PP+ F TK+FHPN+ G IC+++LK W L + VLL+I LL PNP+ L E + D +Y + A T+ +AMG T Sbjct: 16 VYKEVSALAADPPEGIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASRAHLLTEIHAMGGT 160
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis GN=v1g237158 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 170 SAASQVETMAS---KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 + +S VE + K++ +E+ L DPP ED+ QA+I GP +PY GG+F + + D+P PPK F TK+FHPN+ NG IC++ LK+ W P L I +VLL++ LL PNP+ L E + + Y A+ +T+ +A Sbjct: 3 TTSSNVENFSPQIIKQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGPTGTPYEGGIFKIKLVLGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHA 159
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 170 SAASQVETMAS---KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 S S VE ++ +++++EL++++ PP D+ QA I GP +PYA G+F V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M + Y AR T+ +A Sbjct: 3 SQYSNVENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 170 SAASQVETMAS---KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 S S VE ++ +++++EL++++ PP D+ QA I GP +PYA G+F V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M + Y AR T+ +A Sbjct: 3 SQYSNVENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 170 SAASQVETMAS---KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 S S VE ++ +++++EL++++ PP D+ QA I GP +PYA G+F V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M + Y AR T+ +A Sbjct: 3 SQYSNVENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 52/136 (38.24%), Postives = 80/136 (58.82%), Query Frame = 2 Query: 194 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-----KEQ---WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 577 M S+ ++ E + L ++P + DM W + GPPD+ Y GG+F + FPP+YP+ PP++ F ++++HPNI +G +C+ IL +EQ WSPA I +LLS+ SLL +PNPD P + A Y+ Sbjct: 1 MVSRFLMAEYRHLIENPSENFKISVNENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYR 136
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 55/156 (35.26%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 185 VETMASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 + ++ R+ +E K ++D P A P D+ +W+ I G P + + GG++ +T+ FP +YP +PPK F +FHPN+ +G++CL IL E+ W PA+TI ++LL I LL DPN P E M+K D+ +YE R+ ++ A Sbjct: 1 MSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 156
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 53/148 (35.81%), Postives = 89/148 (60.14%), Query Frame = 2 Query: 197 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYE 598 +S + K+L D+++ P SAG V + D++ W+ ++GPPD+ Y GG F + FP DYP KPPK+ F ++++HPNI+ G++C+ IL +E+W P T+ +LLS+ S+LTDPN + P + A M + + +++ Sbjct: 4 SSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFK 151
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 2 Query: 185 VETMASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYE 598 + + A + K+LKDL K P SAG V E ++F W TI+GPPD+ Y GG F + FP +YP PP V F + ++HPN+ +G +C+ IL E+W+P T+ ++LSI S+L+ PN + P E A ++ R++++ Sbjct: 1 MNSQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFK 152
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2S_DROYA (Ubiquitin-conjugating enzyme E2 S OS=Drosophila yakuba GN=GE15576 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 170 SAASQVETMAS---KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 S S VE ++ +++++EL++++ PP D+ QA I GP +PYA GVF V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M + Y AR T+ +A Sbjct: 3 SQYSNVENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159 The following BLAST results are available for this feature:
BLAST of CK938436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938436 ID=CK938436; Name=CK938436; organism=Citrus sinensis; type=EST; length=767bpback to top |