CK938436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENTR (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 8.347e-18 Identity = 57/153 (37.25%), Postives = 76/153 (49.67%), Query Frame = 2 Query: 206 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAF-----RTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 634 RI +++ + K+PP P DM A I GP D+PY GG FL PPDYP PP+V T F+PN NG +CL IL WSPA ++S VL+SI SL+T+ P ++P + H D Y R T + A+ Sbjct: 62 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSLSSVLISIQSLMTENPYHNEPGFEQERH--SGDSKNYNECIRHETIRVAV 212
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBCX_PICAN (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta GN=PEX4 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.347e-18 Identity = 55/176 (31.25%), Postives = 85/176 (48.30%), Query Frame = 2 Query: 203 KRILKELKDLQKDPPTSCSA---------GPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRT----------------------KVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-TDRNKYETTARSWTQKYA 631 KR+LKE + ++K+ S P+ + +F W A I GP SP+ ++ + I P +YP PPK+ F K+ HPN+N G ICLDIL+++WSPA T+ L++I LL +P P PL ++A++ K D Y+ + KY+ Sbjct: 6 KRLLKEYRAVKKELTEKRSPIHDTGIVDLHPLEDGLFRWSAVIRGPDQSPFEDALWKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLDILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANLLKCDDTTAYKDLVHYYIAKYS 181
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.347e-18 Identity = 42/123 (34.15%), Postives = 70/123 (56.91%), Query Frame = 2 Query: 269 VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 V ++M + GP ++PY+GG++ V + P +YP+K P + F ++FHPNI+ +GS+CLD++ + WSP + + + + LL PN DPL E A + + N Y R + +YA Sbjct: 25 VNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIARYA 147
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.090e-17 Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 191 TMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 ++ + ++KE+ +L+ + P +C + H+ + P +S Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D+++Y + ++YA Sbjct: 31 SVRDRLLVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYA 184
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.424e-17 Identity = 46/148 (31.08%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 167 GSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTAR 610 G++ + ++ R+ K++ +L S D+ +++ TI P + Y G F+ + YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ V+ + L T+PN +DPL E A + + + +E R Sbjct: 22 GASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDLMNFEVTIK-PDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVR 168
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2U_HUMAN (Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.860e-17 Identity = 49/143 (34.27%), Postives = 82/143 (57.34%), Query Frame = 2 Query: 215 KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDIL--KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 634 ++ DL+++ +A PV+EDM W+ I G +S + G VF +TIHF +Y + PP V F T FHPN++ + G C+D L E+W+ T+S +LL++ +L++P ++P+ E A + D + Y T R + + M Sbjct: 11 RDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTILRLFNRPLQM 153
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2F_CHICK (NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.860e-17 Identity = 52/168 (30.95%), Postives = 87/168 (51.79%), Query Frame = 2 Query: 152 KAKSGGSAASQVETMASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 +A + S +++ ++ K ++KE+ +L+ + P +C P + ++Q T++ P + Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D+ + + ++YA Sbjct: 18 RASNPASDSTRRVSVRDKLLVKEVAELEANLPCTCKVNFPDPNKLHYFQLTVI-PDEGYYQGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYA 184
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC6_SCHPO (Ubiquitin-conjugating enzyme E2 6 OS=Schizosaccharomyces pombe GN=ubc6 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 2 Query: 197 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 526 A KR++KE LQK+P A P E++ W I GPPD+PY GG + T+ FPPDYPFKPP + T +N +CL D + W+P+ +S +L+ + S +T Sbjct: 6 AYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFMT 116
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17 Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 2 Query: 161 SGGSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 526 S + + +A R+ KEL + Q +PPT V +++ W + G P + YA + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 4 SSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHR-VTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17 Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = 2 Query: 161 SGGSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 526 S + + +A R+ KEL + Q +PPT V +++ W + G P + YA + + + FP YP + P+V F + HP+I SNG ICLDIL + WSPA+T++ V +SI S+L+ Sbjct: 4 SSAPSRKALSKIACNRLQKELSEWQLNPPTGFRH-KVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS 125 The following BLAST results are available for this feature:
BLAST of CK938436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938436 ID=CK938436; Name=CK938436; organism=Citrus sinensis; type=EST; length=767bpback to top |