CK938436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2U_MACFA (Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.066e-17 Identity = 47/143 (32.87%), Postives = 82/143 (57.34%), Query Frame = 2 Query: 215 KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDIL--KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 634 ++ DL+++ +A PV+EDM W+ I G +S + G VF +TIHF +Y + PP V F T FHPN++ + G C+D L ++W+ T+S +LL++ +L++P ++P+ E A + D + Y T + + + M Sbjct: 11 RDFYDLKENNYKGITARPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILTKDESLYRTILKLFNRPLQM 153
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: U2D2L_HUMAN (Putative ubiquitin-conjugating enzyme E2 D2-like protein OS=Homo sapiens GN=UBE2DNL PE=5 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.229e-17 Identity = 42/75 (56.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 194 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFH 418 MA K I KE +L +DP CSAGPV +DM HWQATI P DS Y GGVF + FP DY FKPPK+ F ++H Sbjct: 1 MALKLIHKEFLELARDPQPHCSAGPVWDDMLHWQATITRPNDSSYLGGVFF--LKFPSDYLFKPPKIKFTNGIYH 73
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2F_DANRE (NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.205e-16 Identity = 51/168 (30.36%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 152 KAKSGGSAASQVETMASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 + +G + A+ ++ + ++KE+ +L+ + P++C P + H+Q I P + Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL + A + D+ + + + + YA Sbjct: 18 RTPAGSNDAAHRVSIRDRLLIKEVAELEANLPSTCKVTFPDENKLCHFQLAI-SPDEGYYLGGKFQFEIEVPEAYNMVPPKVKCLTRIWHPNIAETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIDAAEHHLRDKEDFRNKVQDFIKNYA 184
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC4_MIMIV (Probable bifunctional E2/E3 enzyme R795 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R795 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.056e-16 Identity = 44/143 (30.77%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 206 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 634 R+ +E+ D+ K+ +D+ W+ GP +PY G +L I F +YP P + F T + H NIN+ G +C IL ++P + IS +L I LL +P+ +DPL +A +Y YE + K+A+ Sbjct: 1137 RVQREIVDVMKNQHPDIDVYINEQDISFWKIVFKGPDSTPYKNGTWLAYIQFTEEYPNIAPNIRFVTPIKHCNINNYGRVCHSILDRNYTPNVKISLILQCIYGLLLNPDVNDPLDTNLAMIYYDANGLYEAQIIDYVNKFAL 1279
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.056e-16 Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 2 Query: 197 ASKRILKELKDLQKDPPTSCS-AGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARS 613 A RI K++ DL+ S S P+ ++ H + + P + Y GG F I +YP PPKV K++HPNI+ G++CL+IL++ W+P L ++ +L+ + L PN +DPL E A D + + R+ Sbjct: 24 AQIRIQKDVTDLEIPSTMSTSWPDPIKLNVLHLE---IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVRT 160
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2F_RAT (NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.685e-16 Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = 2 Query: 152 KAKSGGSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 +A + S +++ ++ K ++KE+ +L+ + P +C + H + P + Y GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D+ + + ++YA Sbjct: 18 RASASTSDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKRYA 184
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.580e-16 Identity = 49/144 (34.03%), Postives = 72/144 (50.00%), Query Frame = 2 Query: 206 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMG-PPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYE 598 R +EL D +K P+ ++F W +M DS Y GG F + FP D+PF PP+ F ++HPN+ +G +C+ IL E WSP T+ VL+SI SLL DPN + P + A Y+ + +Y+ Sbjct: 14 RQYRELTDPKKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYK 157
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16 Identity = 43/123 (34.96%), Postives = 70/123 (56.91%), Query Frame = 2 Query: 161 SGGSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 526 S S + +A+ R+ KE + Q +PP+ V++++ W + G P + YA + + + FP YP + P+V F+ HP+I SNG ICLD+L + WSPA+ +S + LSI S+L+ Sbjct: 4 SSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHR-VSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLS 125
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UB2FA_MOUSE (NEDD8-conjugating enzyme UBE2F OS=Mus musculus GN=Ube2f PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16 Identity = 49/167 (29.34%), Postives = 80/167 (47.90%), Query Frame = 2 Query: 152 KAKSGGSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 + + S +++ ++ K ++KE+ +L+ + P +C + H + P + Y GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D+ + + ++YA Sbjct: 18 RTSASTSDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKRYA 184
BLAST of CK938436 vs. ExPASy Swiss-Prot
Match: UBE2F_BOVIN (NEDD8-conjugating enzyme UBE2F OS=Bos taurus GN=UBE2F PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.020e-15 Identity = 48/167 (28.74%), Postives = 81/167 (48.50%), Query Frame = 2 Query: 152 KAKSGGSAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 631 +A + S +++ ++ + ++KE+ +L+ + P +C + H + P + Y GG F P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D+ + + ++YA Sbjct: 18 RASATASDSTRRVSVRDRLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYA 184 The following BLAST results are available for this feature:
BLAST of CK938436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938436 ID=CK938436; Name=CK938436; organism=Citrus sinensis; type=EST; length=767bpback to top |