CK938395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_THESI (V-type ATP synthase alpha chain OS=Thermococcus sp. (strain KI) GN=atpA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.409e-36 Identity = 82/196 (41.84%), Postives = 123/196 (62.76%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 587 GGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ ++ + DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FY QAV++G +D +I ++ ++G + KFE E AL+ + + E+L Sbjct: 393 GGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYVDAIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYEKTMQAVDRGVPVD--EIAKLPVREKIGRM-------KFEPDVEKVRALIDETNQQFEEL 579
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_PYRKO (V-type ATP synthase alpha chain OS=Pyrococcus kodakaraensis GN=atpA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.409e-36 Identity = 82/196 (41.84%), Postives = 123/196 (62.76%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 587 GGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ ++ + DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FY QAV++G +D +I ++ ++G + KFE E AL+ + + E+L Sbjct: 393 GGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYIDAIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYEKTMQAVDRGVPVD--EIAKLPVREKIGRM-------KFEPDVEKVRALIDETNQQFEEL 579
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METB6 (V-type ATP synthase alpha chain OS=Methanoregula boonei (strain 6A8) GN=atpA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.409e-36 Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRAL 608 GGDFS+PVT TL IV+VFW LD KL+QR+HFP++NWL SYS Y AL +Y++ PD+ +R+ A VLQ+E +L EIVQLVG DAL E ++IT+E A+++RE +L QNA+ D FC K MM+ I + +LAN A + AG+ +IT K+ L + + + ++ P K+ +D+ A F AL Sbjct: 397 GGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYLDALHDWYDKNVSPDWNKLRSWAMGVLQKEAELQEIVQLVGSDALPETEQITIEVARMIREIFLQQNAYDAVDTFCDMQKQYDMMKAIRLYSDLANTA--QAAGVSPAQITTIKAKNELPQIKF---VKDYKQP----------LAKIEKDMDAEFNAL 584
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_THEGJ (V-type ATP synthase alpha chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=atpA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.146e-36 Identity = 82/196 (41.84%), Postives = 123/196 (62.76%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 587 GGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ ++ + DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FYN +AV++G +D +I ++ ++G + KFE E AL+ + E+L Sbjct: 393 GGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYLDAVQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYNRTMEAVDRGVPVD--EIARLPVREKIGRM-------KFEPDVEKIRALIDETNAQFEEL 579
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_PYRFU (V-type ATP synthase alpha chain OS=Pyrococcus furiosus GN=atpA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.146e-36 Identity = 82/202 (40.59%), Postives = 124/202 (61.39%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRA 605 GGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ ++ + DP++ +R KA E+LQ+E +L EIV++VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR ++ FY A+ +G + ++I ++ +G + KFE E AL+ K + ++L + A Sbjct: 821 GGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVQDWWHKNVDPEWRRMRDKAMELLQKEAELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPQKQVTMMRVLMTFYERTMDAISRGVPL--EEIAKLPVREEIGRM-------KFEPDIEKIRALIDKTNEQFDELLKKYGA 1013
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_META3 (V-type ATP synthase alpha chain OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=atpA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.008e-36 Identity = 85/191 (44.50%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKK 572 GGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y +E ++ E D+ IR +A +LQ+E +L EIVQLVG DAL + +++ LE +++LRED+L Q+AF+ D +C K M++ I+ FY+ A AVEKGA D I +K + + Y + A PA+V K K Sbjct: 395 GGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLQSYSLYLDDIEDWWKENTAEDWREIRDEAMNLLQKEAELQEIVQLVGPDALPDKERVILEVSRMLREDFLQQDAFSDIDSYCSPMKQYTMLKTIMTFYSKAILAVEKGA--DPADIAKVSVKQDVAKMKYTPEEEFLNKLA---PAIVEKISK 580
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_STAMF (V-type ATP synthase alpha chain OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=atpA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.561e-35 Identity = 84/206 (40.78%), Postives = 125/206 (60.68%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDE 617 G DFS+PVT ATL IV+ + LD LA R+H+P++NWLISYS Y + +++ DP + +R KA +LQ+E +L E+V+LVG +AL E DK+ LE A+++RED+L QNAF D +CP K+V MM+ I+ FY L +A+++G M +KI + ++ + + + FED FK L ED+ F +L E Sbjct: 393 GADFSEPVTQATLRIVRALYALDVNLAYRRHYPAINWLISYSLYVDNVTDWWHKNIDPSWRELREKALAILQKEAELEELVRLVGAEALPEEDKLLLEVARMIREDFLQQNAFHEIDTYCPPRKAVLMMKAIMLFYELGLEAIKRGISM--EKIRELKSRVKIARM-KEIPNIDFED----------AFKSLFEDIRRDFESLMKE 585
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_PYRHO (V-type ATP synthase alpha chain OS=Pyrococcus horikoshii GN=atpA PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.561e-35 Identity = 79/196 (40.31%), Postives = 123/196 (62.76%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 587 GGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ ++ + DP++ +R KA +LQ+E +L EIV++VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++FY+ +A+ +G + ++I ++ +G + KFE +L+ K + E+L Sbjct: 772 GGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNIDPEWKAMRDKAMALLQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAINRGVPL--EEIAKLPVREEIGRM-------KFERDVSKIRSLIDKTNEQFEEL 958
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METMJ (V-type ATP synthase alpha chain OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=atpA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.561e-35 Identity = 75/147 (51.02%), Postives = 102/147 (69.39%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 440 GGDFS+PVT TL IV+VFW LD KL+QR+HFP++NWL SYS Y AL +Y+ + P++ +R A VLQ+E +L EIVQLVG DAL + +++T+E A+++RE +L QNA+ D FCP K MM+ I H+ +LA A GA Sbjct: 394 GGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYLDALNEWYDKEVSPEWNPLRAWAMGVLQKEAELQEIVQLVGSDALPDEEQVTIEVARMIREIFLQQNAYDAVDTFCPMSKQYDMMKAIKHYADLARTAQTGGA 540
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METAC (V-type ATP synthase alpha chain OS=Methanosarcina acetivorans GN=atpA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.039e-35 Identity = 85/192 (44.27%), Postives = 117/192 (60.94%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGE-PALVAKFKK 572 GGDFS+PVT TL IV+VFW LD KL+QR+HFP++NWL SYS Y L ++ E PD++ +R KA ++LQ E +L EIVQLVG DAL E ++ LE +++RE YL QNAF P D + PF K +M+ I+ + + A A++ G +IK D L KFE+ +G A++AK K Sbjct: 388 GGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKEDLNDWFTENVAPDYVAMREKAMDMLQTESELQEIVQLVGSDALPEEQQLLLEITRMIREIYLQQNAFHPIDTYSPFAKQYKIMQAIMKYGDAAMDALKSGVPAS------EIIKMESKD---ELPKVKFEEDFDGSLSAVLAKMDK 570 The following BLAST results are available for this feature:
BLAST of CK938395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938395 ID=CK938395; Name=CK938395; organism=Citrus sinensis; type=EST; length=787bpback to top |