CK938373

Overview
NameCK938373
Unique NameCK938373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10319 contig Csv1_Contig10319:120..939. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.859e-64
Identity = 126/257 (49.03%), Postives = 169/257 (65.76%), Query Frame = 1
Query:   55 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPR--RGNDNVLANLDRQTPTCFDNLYYKNLL 819
            MA+ S   L+L++    A+   A++QLS  +Y ++CP ALS +++ + AA+ +E R+GASL+RLHFHDCFV GCD SVLL        E+ A PN  S RGFNVVD IK  +E  C + VSCADILA+A RDSVV  GGPSW V LG               +P P+S+L+ LI +FS +GL + +MVAL+G HT+G+A+C +FR  +YN++NID+SFA +L+  CPR     D+ LA LD  TP  FD+ YY NLL
Sbjct:    1 MASASSVSLMLLVAAAMASA--ASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ-----EQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNIDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLL 250          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 8.597e-64
Identity = 124/261 (47.51%), Postives = 164/261 (62.84%), Query Frame = 1
Query:   64 TSYYFLLLILTFVTATLDQAN--SQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            TS+  LL ++ FV   L   +   +L   YY  +CP+   IVR+ +  A+  ETR+ ASLLRLHFHDCFV GCDGS+LLD +     EK + PN+ SARGF+VVDQIKA LEK CP  VSCAD+L +A RDS V+ GGPSW V LG               IP P +    ++S F+ QGL + ++VAL+G HT+G +RCTSFR  +YN       D  ++ SFA +L+QRCP+ G D +L+ LD  +   FDN Y+KNL+
Sbjct:    5 TSFLLLLSLICFVPLCLCDKSYGGKLFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVLDIISAASFDNSYFKNLI 265          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.466e-63
Identity = 119/254 (46.85%), Postives = 164/254 (64.57%), Query Frame = 1
Query:   76 FLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            F++ ++  V++    +++QL+  +Y  TCP A +IVR+ I  A++++TR+GASL+RLHFHDCFVNGCD S+LLDDT +   EK A PN NSARGFNVVD IK  LE ACP VVSC+D+LA+A+  SV + GGPSW V LG               IP P  +LS +   FSA GL+  ++VAL+G HT G+ARC  F   ++N       D  ++++   +LQQ CP+ G+ + + NLD  TP  FDN Y+ NL
Sbjct:   13 FIISLIVIVSSIFGTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANL 266          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.267e-63
Identity = 121/254 (47.64%), Postives = 167/254 (65.75%), Query Frame = 1
Query:   61 ATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIY-NDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            A +  F LL+L+ +     Q ++QLS  +Y +TCP AL+ +R  +  AI +E R+ ASL+RLHFHDCFV GCD S+LLD+T +   EKTA+PN  SARGF +++  K  +EK CP VVSCADIL +A RD+    GGPSW V+LG               +P P   L+ LISSF+++GLS ++MVAL+G HT+G+A+C  FR  IY N ++ID  FA + +++CP+ G +  LA LD  TP  FDN Y+KNL+
Sbjct:   10 AKAAIFSLLLLSCM-----QCHAQLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYSNGTDIDAGFASTRRRQCPQEGENGNLAPLDLVTPNQFDNNYFKNLI 258          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.612e-62
Identity = 120/260 (46.15%), Postives = 163/260 (62.69%), Query Frame = 1
Query:   76 FLLLILTFVTATLDQAN-----SQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            +L+  LT      D++N       L   +Y+S+CP+A  IVR+ +  A+  ETR+ ASL+RLHFHDCFV GCDGS+LLD + + + EK + PN+ SARGF VVD+IKA LE  CP  VSCAD L +A RDS V+ GGPSW V LG               IP P +  + +++ F+ QGL L ++VAL+G HT+G +RCTSFR  +YN       D  ++ S+A +L+QRCPR G D  L+ LD  +   FDN Y+KNL+
Sbjct:   12 YLIYALTLCICDDDESNYGGDKGNLFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLI 271          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.994e-61
Identity = 117/252 (46.43%), Postives = 156/252 (61.90%), Query Frame = 1
Query:   85 LILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            L + + T     + + LS  +Y+++CP A +IV++ +  A  N+ R+ AS+LRLHFHDCFVNGCD SVLLD +     EK +  N +SARGF V+D+IK+ LE  CP  VSCAD+LA+  RDS+V+ GGPSW+V LG               IP P S L  +++ F+ QGL L ++VAL G HT+G +RC  FR  +YN       D  ++  +A  LQQ CP  GND  L NLD  TPT FDN YYKNL+
Sbjct:   25 LCICYQTHQSTSSVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTPTKFDNYYYKNLV 276          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.897e-61
Identity = 117/236 (49.58%), Postives = 151/236 (63.98%), Query Frame = 1
Query:  130 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            QL+  +Y  TCP A +IVR+ I  A +++TR+GASL+RLHFHDCFV+GCD S+LLDD+ +   EK A PN NSARGFNVVD IK  LE  CP VVSC+DILA+A+  SV + GGPSW V LG               IP P   LS + S FSA GL+  ++VAL+G HT G+ARC  F   ++N       D  ++++   SLQQ CP+ G+ + + NLD  TP  FDN Y+ NL
Sbjct:    1 QLNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQNGSASTITNLDLSTPDAFDNNYFANL 236          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.162e-60
Identity = 112/255 (43.92%), Postives = 161/255 (63.14%), Query Frame = 1
Query:   73 YFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            +F++ ++  V++    +++QL+  +Y  TCP A +IVR+ I  A++++ R+G SL+RLHFHDCFVNGCDGS+LLDDT++   EK A  N NS RGFNVVD IK  LE ACP +VSC+DILA+A+  SV + GGPSW V LG               +P P   L+ + S F A GL   ++V+L+G HT G+ +C +F   ++N       D  ++++   SLQQ CP+ G++  + NLD  TP  FDN Y+ NL
Sbjct:   13 FFIISLIVIVSSLFGTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQNGSNTGITNLDLSTPDAFDNNYFTNL 267          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.162e-60
Identity = 122/270 (45.19%), Postives = 166/270 (61.48%), Query Frame = 1
Query:   55 MAATSYYFLLLILTFVTATL--DQANS------QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            MA    + +LL LT+       D A++       L  ++Y+S+CP+A  IVR+ +  A + ETR+ ASL+RLHFHDCFV GCDGS+LLD + + + EK + PN+ SARGF VVD+IKA LE  CP  VSCAD L +A RDS V+ GGPSW V LG               +P P +    +   FS +GL+L ++VAL+G HT+G +RCTSFR  +YN       D+ ++ S+A  L+QRCPR G D  L+ LD  +   FDN Y+KNL+
Sbjct:    1 MARIGSFLILLSLTYALTLCICDNASNFGGNKRNLFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLI 270          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.982e-60
Identity = 119/255 (46.67%), Postives = 164/255 (64.31%), Query Frame = 1
Query:   76 FLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLS-LKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            FLLL+L      +  +++QLS ++Y  TCP+   IV   I+ A++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F  EK A  N NSARGF+V+D++KA +EKACPR VSCAD+LAIA ++S+V+ GGPSW V  G               +P P+S L  L   F   GL    ++VAL+GGHT GK++C      +YN       D  +D S+  +L+++CPR GN +VL + D +TPT FDN YY NL
Sbjct:   10 FLLLLLQ-----VSLSHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNL 259          
The following BLAST results are available for this feature:
BLAST of CK938373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER2_ORYSI3.859e-6449.03Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER49_ARATH8.597e-6447.51Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER53_ARATH1.466e-6346.85Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PERX_NICSY3.267e-6347.64Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER15_ARATH3.612e-6246.15Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER36_ARATH3.994e-6146.43Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PERA2_ARMRU8.897e-6149.58Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER54_ARATH1.162e-6043.92Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER14_ARATH1.162e-6045.19Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER38_ARATH1.982e-6046.67Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_F11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938373 ID=CK938373; Name=CK938373; organism=Citrus sinensis; type=EST; length=820bp
GGGACGTATTTATAAAGGCAAAAATCTCTCTTGACGACTGCAGAAGTGCT
AGATATGGCAGCAACAAGTTACTACTTTCTCCTTCTTATACTTACTTTTG
TCACTGCAACTCTTGATCAAGCCAACTCCCAACTCTCAACAAACTACTAC
AAATCCACATGCCCAAAAGCATTGTCTATTGTTCGGGCAGGGATTATAGC
TGCTATAAAAAATGAAACACGCGTAGGGGCGTCTTTACTTCGACTTCATT
TCCACGACTGCTTTGTCAATGGCTGCGATGGATCGGTACTGTTGGATGAT
ACGGCCAATTTCATAGGAGAGAAAACAGCAGTTCCTAACAATAACTCGGC
CAGAGGGTTCAACGTGGTGGATCAGATTAAAGCTAATCTGGAGAAAGCAT
GCCCCCGTGTTGTTTCGTGTGCAGATATTCTTGCCATTGCCACACGCGAT
TCAGTTGTTGTTTTCGGAGGTCCTTCATGGAAAGTTAGATTGGGAAGAAG
AGATTCTACCACTGCTAGCAGGGCAGCGGCAAATACCTCCATCCCTCCAC
CCACTTCTAATTTGAGTGCTCTCATATCAAGCTTCTCGGCACAGGGTCTC
TCATTAAAGAACATGGTGGCTCTTGCTGGTGGACATACGGTAGGCAAGGC
AAGGTGCACATCATTTCGAGGACACATTTACAACGATTCCAATATTGACA
CCAGCTTCGCCAGGTCCTTGCAGCAGAGATGCCCAAGAAGAGGAAATGAC
AATGTTCTGGCAAACCTTGACCGTCAAACTCCAACGTGCTTTGACAATTT
ATATTACAAGAATCTGTTGA
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