CK938373

Overview
NameCK938373
Unique NameCK938373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10319 contig Csv1_Contig10319:120..939. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.507e-55
Identity = 112/261 (42.91%), Postives = 160/261 (61.30%), Query Frame = 1
Query:   58 AATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            + +S + +L+ L  +      + +QL+  +Y  +CP   +IVR  I+  ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F  EK A  N NSARGF V+D++KA +E+ACPR VSCAD+L IA + SV + GGPSW+V LG               +P P   L  L +SF   GL    ++VAL+GGHT GK +C      +YN SN       ++T++ ++L+  CP  GN + L + D +TPT FDN YY NL
Sbjct:    7 STSSTWTILITLGCLMLHASLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDFDLRTPTVFDNKYYVNL 267          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.275e-55
Identity = 115/257 (44.75%), Postives = 151/257 (58.75%), Query Frame = 1
Query:   79 LLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDT----------SFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            L+++    T+ L      L   +YK +CP A  IV+  I  A+  + R+ ASLLRL FHDCFV GCD SVLLD   + + EK A PN NS RGF V+D IK  LE+ACP  VSC+DILA+A RDSV + GGP W+V LG               IP P S+L +LI +F  QGL++++++AL+G HT+GKARC SF+  I   +   T          +F R L  +C     DN L+ LD +TP  FDN Y+ NLL
Sbjct:   12 LIVLYAITTSVLGDFGEPLLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPLDIKTPAYFDNHYFINLL 268          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 5.586e-55
Identity = 113/252 (44.84%), Postives = 156/252 (61.90%), Query Frame = 1
Query:   85 LILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLS-LKNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            L+   + A+L  A  QL+  +Y ++CP   +IVR  I+  ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F  EK A  N NSARGF V+D++KA +E ACPR VSCAD+L IA + SV + GGPSW+V LG               +P P   L  L  SF   GL+   ++VAL+GGHT GK +C      +YN SN       ++T++ ++L+  CP  GN + L + D +TPT FDN YY NL
Sbjct:   18 LVCLILHASLSDA--QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNL 267          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.123e-54
Identity = 109/252 (43.25%), Postives = 152/252 (60.32%), Query Frame = 1
Query:   85 LILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            LIL+ +      +N+QL  ++Y  TCP   +I+   I+  ++ + R+ ASLLRLHFHDCFV GCD S+LLD++ +F  EK A PN NSARGF V+D++K +LE+ACPR VSCAD+L IA++ SV++ GGP W V LG               +P P   L+ L  +F+  GL+   ++VAL+GGHT G+A+C      +YN       D  +D ++   L+  CP+ GN  VL N D  TP  FD  YY NL
Sbjct:   15 LILSCLLLQASNSNAQLRPDFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQNGNGTVLVNFDVVTPNTFDRQYYTNL 266          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.772e-54
Identity = 112/254 (44.09%), Postives = 153/254 (60.24%), Query Frame = 1
Query:   79 LLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            L+L LT +T  +      L   +Y  TCP+A SIVR  +  A+  E R  AS++R  FHDCFVNGCD S+LLDDT N +GEK ++ N +S R F VVD IK  LEKACP  VSCADI+ +A RD+V + GGP W+V+LG               +P P +N + LI  F    LS+K+MVAL+G H++G+ RC S    +YN S        ++ S+ + L + CP  G++NV  +LD  TP  FDN Y+K+L+
Sbjct:    7 LILYLTLLTVVV--TGETLRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLD-ATPQVFDNQYFKDLV 257          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.053e-53
Identity = 110/252 (43.65%), Postives = 154/252 (61.11%), Query Frame = 1
Query:   85 LILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLS-LKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            LIL  +      +N+QL  ++Y  TCP    I+   I+  ++ + R+ ASLLRLHFHDCFV GCD S+LLD++ +F  EK A PN NSARGFNV+D++K  LE+ACP  VSCADIL IA++ SV++ GGP W V LG               +P P  NL+ L ++F+  GL+   ++VAL+GGHT G+A+C      +YN       D +++ ++   L++ CP+ GN  VL N D  TP  FD+ YY NL
Sbjct:   15 LILGCLLLQASNSNAQLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCPQNGNGTVLVNFDVVTPDAFDSQYYTNL 266          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.828e-53
Identity = 104/239 (43.51%), Postives = 144/239 (60.25%), Query Frame = 1
Query:  133 LSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYND-------SNIDTSFARSLQQRCPR---RGNDNVLANLDRQTPTCFDNLYYKNLL 819
            L+ +YYKSTCP    +++  +   +K + R  A ++RLHFHDCFV GCDGSVLLD+T    GEK A PN NS +G+ +VD+IK  +E  CP VVSCAD+L I  RD+ ++ GGP W V +G               +P P   L ++I+ F +QGLS+++MVAL G HT+GKA+C +FR  IY D       + +  ++  SL++ CP     G+ NV A +D  TP  FDN  Y  LL
Sbjct:   30 LTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPASSGEGDSNVTA-IDNVTPNLFDNSIYHTLL 267          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.165e-52
Identity = 111/250 (44.40%), Postives = 148/250 (59.20%), Query Frame = 1
Query:   91 LTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGND-NVLANLDRQTPTCFDNLYYKNL 816
            + F+ A    +N+QLS  +Y +TCP   SIVR  +    + + R GA ++RLHFHDCFVNGCDGS+LLD T     EK A P N  A GF++VD IK  LE  CP VVSCADILA+A+   VV+  GPSW+V  G               IP P   L+ +I  F+ +G+ L ++VAL+G HT G+ARC +F   ++N       D  +D +F ++LQ  CP+ GN+ N   NLD  TP  FDN Y+ NL
Sbjct:   10 ILFLVAIFGASNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLD-TDGTQTEKDA-PANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNL 257          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.987e-52
Identity = 105/241 (43.57%), Postives = 149/241 (61.83%), Query Frame = 1
Query:  127 SQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFA--RSLQQRCPR-RGNDNVLANLDRQTPTCFDNLYYKNLL 819
            S L+  +Y  +CP+  +IV++G+  A K+++R+ ASLLRLHFHDCFVNGCDGS+LL+D+ +F GEK A PN NS RGF V++ IK+++E +CP  VSCADI+A+A R++VV+ GGP W V LG               +P P   L  + + F   GL LK++V L+G HT+G A+C   +  ++N       D N+  S A    L+  CP    +D+ LA LD  +   FDN YY NL+
Sbjct:   46 SNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLM 286          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.507e-49
Identity = 109/262 (41.60%), Postives = 153/262 (58.40%), Query Frame = 1
Query:   61 ATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGN--DNVLANLDRQTPTCFDNLYYKNLL 819
            A S   +  ++  V A +  + + L  +YY  +CP A  I+   +  A   + +V A LLR+ FHDCF+ GCD S+LLD T +   EK   P N S R F V++  K  LEKACPR VSCAD++AIA RD V + GGP W V  G               +PPPT N+S LI SF+A+GLS+K+MV L+GGHT+G + C+SF   + N       D +++ +FA++L+++CPR  N   N    LD  T + FDN+YYK +L
Sbjct:    2 AFSKGLIFAMIFAVLAIVKPSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDG-PPNISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKG-RKDGTISRANETRNLPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLD-STSSVFDNVYYKQIL 260          
The following BLAST results are available for this feature:
BLAST of CK938373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER34_ARATH2.507e-5542.91Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER20_ARATH3.275e-5544.75Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER1A_ARMRU5.586e-5544.84Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER3_ARMRU2.123e-5443.25Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER17_ARATH2.772e-5444.09Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER22_ARATH1.053e-5343.65Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER11_ARATH6.828e-5343.51Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PERX_TOBAC1.165e-5244.40Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER10_ARATH1.987e-5243.57Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER66_ARATH3.507e-4941.60Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_F11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938373 ID=CK938373; Name=CK938373; organism=Citrus sinensis; type=EST; length=820bp
GGGACGTATTTATAAAGGCAAAAATCTCTCTTGACGACTGCAGAAGTGCT
AGATATGGCAGCAACAAGTTACTACTTTCTCCTTCTTATACTTACTTTTG
TCACTGCAACTCTTGATCAAGCCAACTCCCAACTCTCAACAAACTACTAC
AAATCCACATGCCCAAAAGCATTGTCTATTGTTCGGGCAGGGATTATAGC
TGCTATAAAAAATGAAACACGCGTAGGGGCGTCTTTACTTCGACTTCATT
TCCACGACTGCTTTGTCAATGGCTGCGATGGATCGGTACTGTTGGATGAT
ACGGCCAATTTCATAGGAGAGAAAACAGCAGTTCCTAACAATAACTCGGC
CAGAGGGTTCAACGTGGTGGATCAGATTAAAGCTAATCTGGAGAAAGCAT
GCCCCCGTGTTGTTTCGTGTGCAGATATTCTTGCCATTGCCACACGCGAT
TCAGTTGTTGTTTTCGGAGGTCCTTCATGGAAAGTTAGATTGGGAAGAAG
AGATTCTACCACTGCTAGCAGGGCAGCGGCAAATACCTCCATCCCTCCAC
CCACTTCTAATTTGAGTGCTCTCATATCAAGCTTCTCGGCACAGGGTCTC
TCATTAAAGAACATGGTGGCTCTTGCTGGTGGACATACGGTAGGCAAGGC
AAGGTGCACATCATTTCGAGGACACATTTACAACGATTCCAATATTGACA
CCAGCTTCGCCAGGTCCTTGCAGCAGAGATGCCCAAGAAGAGGAAATGAC
AATGTTCTGGCAAACCTTGACCGTCAAACTCCAACGTGCTTTGACAATTT
ATATTACAAGAATCTGTTGA
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