CK938373

Overview
NameCK938373
Unique NameCK938373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10319 contig Csv1_Contig10319:120..939. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.755e-43
Identity = 101/256 (39.45%), Postives = 138/256 (53.91%), Query Frame = 1
Query:   79 LLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSAR-GFNVVDQIKANLEKA--CPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            LLL+L  +  TLD +++QL  N+Y  +CP    IVR  +   ++       + LRL+FHDCFVNGCD SV++  T N   EK    N + A  GF+ V + K  L+    C   VSCADIL +ATRD V + GGP + V LG               +P PT +++ L S F+  GLSL +M+AL+G HT+G A CT     IY        D  ++  +   L+  CPR  +  V  N+D  TP  FDN+YYKNL
Sbjct:    9 LLLLLLSLCLTLDLSSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNIDPRVAINMDPTTPRQFDNVYYKNL 264          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.179e-42
Identity = 97/256 (37.89%), Postives = 138/256 (53.91%), Query Frame = 1
Query:   70 YYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            + F+L +   +T    Q        +Y  TCP+A SIVR+ + + + ++  + A +LR+HFHDCFV GCDGS+L+   A    EKTA  N    RG+ ++D  K  LE ACP VVSCADILA+A RDSVV+ GG SW+V  G               +P P+ ++      F+A+GL+ +++V L GGHT+G + C  F   ++N       D  ID SF  +LQ  CP+         LD  +   FD  Y+ NL
Sbjct:   14 FVFMLGLCIGITTVHGQGTR---VGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT---EKTAFANLG-LRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTG-RRDGRVSQASDVSNLPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQNTGAANRVALDTGSQFKFDTSYFSNL 261          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.082e-42
Identity = 98/257 (38.13%), Postives = 141/257 (54.86%), Query Frame = 1
Query:   73 YFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSAR-GFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            +FL ++L  + A   ++N+QLS NYY STCP    IV+  +    K       + LR+ FHDCFV GCD SV +  + N   EK A  N + A  GF+ V + K  +E  CP VVSCADILA+A RD VV+ GGP +KV LG               +P P  ++  L+  F++ GLSL +M+AL+G HT+G + C  F   ++N       D  +D  +A+ L Q C    N + + ++D  +   FDN YY+NL+
Sbjct:   15 WFLGMLLFSMVA---ESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIA-SENEDAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQAC-SDPNPDAVVDIDLTSRDTFDNSYYQNLV 266          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.578e-41
Identity = 101/252 (40.08%), Postives = 145/252 (57.54%), Query Frame = 1
Query:   82 LLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARC-------TSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            LL+L F+      A +QL   +Y  +CP+A +IVR  +         V A+LLR+HFHDCFV GCD S+L+D T +   EKTA PN  S R F+++D+IKA LE ACP  VSCADI+ +ATRDSV + GGPS+ +  G               +P PT ++S  +S F+ +G++  + VAL G HTVG+  C       TSF+G    D ++D +   SL+  C     ++  A LD+ +P  FDN ++K +
Sbjct:   10 LLVLFFIFPI---AFAQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTNS---EKTAGPNG-SVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTG--RRDGRVSNNLDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTC----RNSATAALDQSSPLRFDNQFFKQI 248          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.691e-41
Identity = 97/263 (36.88%), Postives = 144/263 (54.75%), Query Frame = 1
Query:   40 AEVLDMAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNN-SARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHI--YNDSNIDTSFARSLQQRCPRRGNDNVLANL-DRQTPTCFDNLYYKNL 816
            AE   +   +   LLL L+F + +   A S L+ ++Y  +CPK L I+R  I     +     A+ LRL FHDCF NGCD SVL+  TA    E+ +  N +    GF+VV + K  LE ACP  VSC+DI+A+A RD +V  GGP +++ LG               +P P+  +S LI  FS++G S++ MVAL+G HT+G + C  F   +   N +  +  FA +L++ C    ND  ++   D  TP  FDN+Y++N+
Sbjct:    2 AEQSQLKNLTIILLLLCLSFQSLSF-AAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNI 263          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.691e-41
Identity = 94/257 (36.58%), Postives = 143/257 (55.64%), Query Frame = 1
Query:   55 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNN-SARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHI-YNDSNIDTSFARSLQQRCPRRGNDNVLANL-DRQTPTCFDNLYYKNL 816
            MA+    FLL +  F       A S+L+TN+Y  TCP+ L I+R  I           A+++RL FHDCF NGCD SVL+  TA    E+ +  N +    GF+V+ + K  LE ACP  VSC+DI+++ATRD ++  GGP + V LG               +P P++ +S +I  F ++G +++ MVAL+G H++G + C  F G +  N++  +  FA +L++ C     D  ++   D  TP  FDN+YY+NL
Sbjct:    1 MASLKSLFLLFLFFFT------AQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRVGRNNTGYNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQNL 251          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.023e-40
Identity = 94/252 (37.30%), Postives = 138/252 (54.76%), Query Frame = 1
Query:   73 YFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARC-------TSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYY 807
            + +LL+L F+      A +QL   +Y  +CP A +IV   +      +  + A+L R+HFHDCFV GCD S+L+D T + + EK A PN  S RGF ++D+IK  LE  CP  VSC+DI+ +ATRD+V + GGPS+ V  G               +PPP  ++  ++S F  +G+++ + VAL G HTVG A C       T+F+G    D ++D + A  L+  C   G    L      TP  FDNL++
Sbjct:    6 FSVLLLLLFIFPV---ALAQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNF-SVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTCAVPGGFAALDQSMPVTPVSFDNLFF 253          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.075e-40
Identity = 94/256 (36.72%), Postives = 140/256 (54.69%), Query Frame = 1
Query:   73 YFLLLILTF-VTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            + ++L+L   VT  L Q        +Y STCP+A SIV++ + A  +++  V   +LR+HFHDCFV GCDGS+L++ +     E+TA+PN N  +GF+V++  K  +E  CP VVSCADILA+A RDSVV   G +W V  G               +P    ++      F  +GL+ +++VAL G HT+G A C   R  ++N       D +ID +F   L+  CP+ G+ +    LD  +   FD  Y+ NL
Sbjct:   14 FMVILVLAIDVTMVLGQGTR---VGFYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGSD---AERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTG-RRDGRVSRAADAGDLPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQNGDASRRVGLDTGSVNNFDTSYFSNL 261          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.629e-40
Identity = 90/255 (35.29%), Postives = 140/255 (54.90%), Query Frame = 1
Query:   79 LLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDS---------NIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            LL +L F+++ L  +++ LS N+Y S+C  A  +VR  + +A  ++  +   LLRL FHDCFV GCD SVL+   +     + + P N S  GF+V+D  K  +E  CP  VSCADI+A+A RD+V   GGP  ++  G               I      L  +I +FS++GLS++++V L+G HT+G + C +F G    DS         ++D S+A +L  +C    + ++  + D +T   FDN YY+NL
Sbjct:   12 LLHLLMFLSSLLT-SSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNST----EKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVSNDPETSAVFDNQYYRNL 261          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.929e-39
Identity = 98/264 (37.12%), Postives = 137/264 (51.89%), Query Frame = 1
Query:   55 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSAR-GFNVVDQIKANLEK--ACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSF--RGHIYN-----DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            MA      L+ +   ++   D   +QLS  +Y  TCP    IVR  +   IK       + LRL FHDCFVNGCD SV++  T     EK    N + A  GF+VV Q K  L+   +C   VSCADIL +ATRD VV  GGPS++V LG               +P P+ N+  L + F+   L+ ++M+AL+  HT+G A C     R H +N     D  ++ ++A  LQ+ CP+  +  +  N+D  TP  FDN Y+KNL
Sbjct:    1 MARFDIVLLIGLCLIISVFPDTTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNVDPRIAINMDPVTPKTFDNTYFKNL 264          
The following BLAST results are available for this feature:
BLAST of CK938373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER50_ARATH3.755e-4339.45Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER2_ARAHY3.179e-4237.89Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER55_ARATH7.082e-4238.13Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER57_ARATH1.578e-4140.08Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER63_ARATH2.691e-4136.88Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER31_ARATH2.691e-4136.58Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER28_ARATH1.023e-4037.30Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PERN1_TOBAC5.075e-4036.72Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER46_ARATH6.629e-4035.29Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER35_ARATH1.929e-3937.12Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_F11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938373 ID=CK938373; Name=CK938373; organism=Citrus sinensis; type=EST; length=820bp
GGGACGTATTTATAAAGGCAAAAATCTCTCTTGACGACTGCAGAAGTGCT
AGATATGGCAGCAACAAGTTACTACTTTCTCCTTCTTATACTTACTTTTG
TCACTGCAACTCTTGATCAAGCCAACTCCCAACTCTCAACAAACTACTAC
AAATCCACATGCCCAAAAGCATTGTCTATTGTTCGGGCAGGGATTATAGC
TGCTATAAAAAATGAAACACGCGTAGGGGCGTCTTTACTTCGACTTCATT
TCCACGACTGCTTTGTCAATGGCTGCGATGGATCGGTACTGTTGGATGAT
ACGGCCAATTTCATAGGAGAGAAAACAGCAGTTCCTAACAATAACTCGGC
CAGAGGGTTCAACGTGGTGGATCAGATTAAAGCTAATCTGGAGAAAGCAT
GCCCCCGTGTTGTTTCGTGTGCAGATATTCTTGCCATTGCCACACGCGAT
TCAGTTGTTGTTTTCGGAGGTCCTTCATGGAAAGTTAGATTGGGAAGAAG
AGATTCTACCACTGCTAGCAGGGCAGCGGCAAATACCTCCATCCCTCCAC
CCACTTCTAATTTGAGTGCTCTCATATCAAGCTTCTCGGCACAGGGTCTC
TCATTAAAGAACATGGTGGCTCTTGCTGGTGGACATACGGTAGGCAAGGC
AAGGTGCACATCATTTCGAGGACACATTTACAACGATTCCAATATTGACA
CCAGCTTCGCCAGGTCCTTGCAGCAGAGATGCCCAAGAAGAGGAAATGAC
AATGTTCTGGCAAACCTTGACCGTCAAACTCCAACGTGCTTTGACAATTT
ATATTACAAGAATCTGTTGA
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