CK938363

Overview
NameCK938363
Unique NameCK938363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2216 contig Csv1_Contig2216:1089..1683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.051e-13
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 1
Query:   10 EFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIG 132
            E V  YEDKDGDWMLVGDVPWEMFI++CKRLRIMK +DA G
Sbjct:  126 EHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKG 166          
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.051e-13
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 1
Query:    4 GSEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGL 135
            GSE+   YEDKDGDWMLVGDVPW MF+ +CKRLRI+K ++A GL
Sbjct:  157 GSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGL 200          
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13
Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 1
Query:    4 GSEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGL 135
            GS FV  YEDKDGDWMLVGDVPW+MF  +CKRLRIMK +DA  L
Sbjct:  127 GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170          
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 31/46 (67.39%), Postives = 39/46 (84.78%), Query Frame = 1
Query:    7 SEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPR 144
            +E+ L YED+DGDWMLVGDVPWEMF+ + KRLRIM+++DA GL  R
Sbjct:  221 AEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 31/46 (67.39%), Postives = 39/46 (84.78%), Query Frame = 1
Query:    7 SEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPR 144
            +E+ L YED+DGDWMLVGDVPWEMF+ + KRLRIM+++DA GL  R
Sbjct:  221 AEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: AX22A_PHAAU (Auxin-induced protein 22A OS=Phaseolus aureus GN=AUX22A PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 1
Query:   10 EFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDA--IGLAPR 144
            E V  YEDKDGDWMLVGDVPWEMF+++CKRLRIMK  DA   GL P+
Sbjct:  136 EHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRADAKGFGLQPK 182          
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA15_ARATH (Auxin-responsive protein IAA15 OS=Arabidopsis thaliana GN=IAA15 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 1
Query:   10 EFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGL 135
            EFV  YEDKDGD MLVGDVPW MF+++CKR+R+MK+ DAIGL
Sbjct:  138 EFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179          
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.507e-12
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 1
Query:    7 SEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIG 132
            +E V  YEDKDGDWMLVGDVPWEMF ++CKRLRIMK +DA G
Sbjct:  129 AEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKG 170          
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA26_ORYSJ (Auxin-responsive protein IAA26 OS=Oryza sativa subsp. japonica GN=IAA26 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.294e-12
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1
Query:    1 GGSEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRA 147
            G  E  + YED DGDWMLVGDVPWEMF+ +CKR+R+M++ +A GL+  A
Sbjct:   92 GEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLSSNA 140          
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.527e-12
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 1
Query:    7 SEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGL 135
            S+F + YEDKDGD MLVGDVP+EMFI TCKRLRIMK ++A GL
Sbjct:  150 SDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGL 192          
The following BLAST results are available for this feature:
BLAST of CK938363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
IAA6_PEA5.051e-1380.49Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA... [more]
AX22E_PHAAU5.051e-1370.45Auxin-induced protein 22E OS=Phaseolus aureus GN=A... [more]
IAA2_ARATH6.597e-1375.00Auxin-responsive protein IAA2 OS=Arabidopsis thali... [more]
IAA10_ORYSJ8.616e-1367.39Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA10_ORYSI8.616e-1367.39Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
AX22A_PHAAU8.616e-1372.34Auxin-induced protein 22A OS=Phaseolus aureus GN=A... [more]
IAA15_ARATH1.920e-1273.81Auxin-responsive protein IAA15 OS=Arabidopsis thal... [more]
AX22C_PHAAU2.507e-1276.19Auxin-induced protein 22C OS=Phaseolus aureus GN=A... [more]
IAA26_ORYSJ7.294e-1259.18Auxin-responsive protein IAA26 OS=Oryza sativa sub... [more]
IAA31_ORYSJ9.527e-1274.42Auxin-responsive protein IAA31 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_G09 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938363 ID=CK938363; Name=CK938363; organism=Citrus sinensis; type=EST; length=596bp
GGGGGCTCAGAATTCGTTCTCGCTTATGAAGACAAAGATGGGGATTGGAT
GCTTGTGGGTGATGTCCCCTGGGAGATGTTTATTGATACATGCAAGAGGT
TGAGGATTATGAAGAGCACTGATGCCATTGGCCTAGCGCCAAGGGCTGTG
GAGAAATGCAGGAACAGAAACTAGCTACTGTTCAACATATTGTTGGTATT
CATCCAGCAATTCTCGGTGATAAAATTCTGGCAGATGACAGAAAATAACA
TGATCCAAATTCATGCTTGGGGGTGTTGGAGGGCATCTGCTTTTCTGTGT
TACCACATTACTACGTTTACTGTGATGGATTTTCATGTTCTGTAAGCTGT
GATTGTTGTCTTGTTATTAAAATTATAAAACTCTCGTAGACCTTGTATTT
TGGAGTGAACCTCTGAGATTGGATCTCCTCAAGGAGTTCTGACAAGTTCC
TGTTCCCAACAGGTACCTTAGTTTGTAAAGTGCGTTGTTTGTTGAACTAC
TTTGTTATGCGTGCTTGTTTGGTGAAAAAAAAAAAGACATCATCCATGTC
ATTAATTCGTAACCCTGTCTCNNANAAAAAAAAAAAAAAAAAAAAA
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