CN187565

Overview
NameCN187565
Unique NameCN187565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBL_HORVU (Non-symbiotic hemoglobin OS=Hordeum vulgare GN=HB PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.182e-60
Identity = 111/152 (73.03%), Postives = 136/152 (89.47%), Query Frame = -3
Query:  195 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVP-EMWSPEMKSAWSEAYDQLVAAIKSEMKPS 647
            F+EE+EALV+KSW +MKK++  LGL+FFL+IFEIAPSA+++F FLRDS+VPLE N KLKTHA+SVFVMTCE+A QLRKAGK+TVRE+TLK+LG  H KYGV + HFEVT+F+LLETIKEA+P +MW PEM++AW EAYDQLVAAIK EMKP+
Sbjct:   10 FSEEKEALVLKSWAIMKKDSANLGLRFFLKIFEIAPSARQMFPFLRDSDVPLETNPKLKTHAVSVFVMTCEAAAQLRKAGKITVRETTLKRLGGTHLKYGVADGHFEVTRFALLETIKEALPADMWGPEMRNAWGEAYDQLVAAIKQEMKPA 161          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBL1_ORYSJ (Non-symbiotic hemoglobin 1 OS=Oryza sativa subsp. japonica GN=HB1 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.865e-60
Identity = 111/153 (72.55%), Postives = 136/153 (88.89%), Query Frame = -3
Query:  195 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVP-EMWSPEMKSAWSEAYDQLVAAIKSEMKPS 650
            +F+EEQEALV+KSW ++KK++  + L+FFL+IFE+APSA ++FSFLR+S+VPLE+N KLKTHAMSVFVMTCE+A QLRKAGKVTVR++TLK+LGA H KYGV + HFEV KF+LL+TIKE VP +MWSP MKSAWSEAYD LVAAIK EMKP+
Sbjct:   13 SFSEEQEALVLKSWAILKKDSANIALRFFLKIFEVAPSASQMFSFLRNSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHLKYGVGDAHFEVVKFALLDTIKEEVPADMWSPAMKSAWSEAYDHLVAAIKQEMKPA 165          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBL3_ORYSJ (Non-symbiotic hemoglobin 3 OS=Oryza sativa subsp. japonica GN=HB3 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.035e-56
Identity = 106/153 (69.28%), Postives = 131/153 (85.62%), Query Frame = -3
Query:  192 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVP-EMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 647
            FTEEQEALV+KSW +MK ++  +G +FFL+IFE+APSA++LFSFLR+S+VPLE+N KLK HAM+VFVMTCE+A QLRK G+VTVR++T+K+LG+ HFK GV + HFEV KF+LLETIKEAVP  MWSP MK AW EAYD LVAAIK  MKP++
Sbjct:   16 FTEEQEALVLKSWAIMKNDSAHIGHRFFLKIFEVAPSARQLFSFLRNSDVPLEKNPKLKIHAMAVFVMTCEAAAQLRKTGRVTVRDTTIKRLGSTHFKNGVSDAHFEVAKFALLETIKEAVPASMWSPAMKGAWGEAYDHLVAAIKQGMKPAA 168          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBL4_ORYSJ (Non-symbiotic hemoglobin 4 OS=Oryza sativa subsp. japonica GN=HB4 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.265e-54
Identity = 101/151 (66.89%), Postives = 128/151 (84.77%), Query Frame = -3
Query:  198 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVP-EMWSPEMKSAWSEAYDQLVAAIKSEMKP 647
            FTEEQEALV+KSW +MK ++  +G +FFL+IFE+APSA+ LFSFLR+S+VPLE+N  LK HAM+VFVMTCE+A QLRK G+VTVR++T+K+LG+ HFK GV + HFEV +F+LLETIK+ +P  MWSPEMK+AW EAY+ LVAAIK  MKP
Sbjct:   13 FTEEQEALVLKSWAIMKDDSANIGHRFFLKIFEVAPSARHLFSFLRNSDVPLEKNPNLKKHAMAVFVMTCEAAAQLRKTGRVTVRDTTIKRLGSTHFKNGVSDTHFEVARFALLETIKDGIPASMWSPEMKNAWGEAYEHLVAAIKEGMKP 163          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBL2_SOLLC (Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum GN=HB2 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41
Identity = 84/148 (56.76%), Postives = 108/148 (72.97%), Query Frame = -3
Query:  204 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 647
            FT++QEALV  SW  MK++  +L L+FF  I EIAP A+ +FSFL+DS+   E N KL+ HA+ VF MTCESA+QLR+ G+V V E+TLK LG++H +  V + HFEV K +LL T+KEA    W  EMK AWSEAYDQL +AIK+EM
Sbjct:    3 FTDKQEALVRDSWEFMKQDIPQLSLRFFSLILEIAPVAKNMFSFLKDSDELPENNPKLRAHAVKVFKMTCESAIQLREKGEVVVGETTLKYLGSIHLQKRVADPHFEVVKEALLRTVKEATGNKWKDEMKEAWSEAYDQLASAIKAEM 150          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBL2_GOSHI (Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum GN=HB2 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.574e-41
Identity = 86/150 (57.33%), Postives = 109/150 (72.67%), Query Frame = -3
Query:  201 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAV-PEMWSPEMKSAWSEAYDQLVAAIKSEMK 647
            FTE+QE LV +SW V+K++     L+FF  I EIAP A+ +FSFLR+S    + N KLK HA+ VF MTCESA+QLR+ G+V V ++TLK LG VH K GV + HFEV K +LL TI+EA+  E W+ EMK+AW EAYDQL  AIK+EMK
Sbjct:    3 FTEKQEGLVKESWEVLKQDIPHSSLRFFSLILEIAPGAKNMFSFLRESEEIPQNNPKLKAHAVKVFKMTCESAIQLREKGEVVVADTTLKYLGTVHVKSGVKDPHFEVVKEALLRTIEEAIGEEKWNEEMKNAWGEAYDQLAEAIKAEMK 152          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBL2_ARATH (Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana GN=AHB2 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.097e-41
Identity = 81/149 (54.36%), Postives = 112/149 (75.17%), Query Frame = -3
Query:  201 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMK 647
            FTE+QEALV +SW ++K++  +  L FF +I EIAP+A+ LFSFLRDS+     N KLK HA+ VF MTCE+A+QLR+ GKV V ++TL+ LG++H K GV++ HFEV K +LL T+KE + E ++ E++ AWS+AYD L  AIK+EMK
Sbjct:    6 FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKAHAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEGLGEKYNEEVEGAWSQAYDHLALAIKTEMK 154          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBL2_BRANA (Non-symbiotic hemoglobin 2 OS=Brassica napus GN=HB2 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.358e-40
Identity = 80/149 (53.69%), Postives = 113/149 (75.84%), Query Frame = -3
Query:  201 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMK 647
            FTE+QEALV +SW ++K++  +  L FF +I EIAP+A+ +FSFLRD++     N KLK HA+ VF MTCE+A+QLR+ GKV V ++TL+ LG+VHFK GV++ HFEV K +L+ T+KE + E ++ E++ AWS+AYD L  AIK+EMK
Sbjct:    6 FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKDMFSFLRDTDEVPHNNPKLKAHAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSVHFKSGVLDPHFEVVKEALVRTLKEGLGEKYNEEVEGAWSKAYDHLALAIKAEMK 154          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBL0_PHYPA (Non-symbiotic hemoglobin 0 OS=Physcomitrella patens GN=GLB0 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.699e-38
Identity = 72/150 (48.00%), Postives = 106/150 (70.67%), Query Frame = -3
Query:  204 RAFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 653
            + +++E E LV +SW ++KK+A   G+ FF ++FEIAP A+ ++SFLRDS +P E+N K+K HA  VF+MT ++AVQL + G   V ES L+KL A H   GV ++ FE+ K ++L  I+  VP++WSPE+KSAW +AYD L   +K+EM
Sbjct:   22 KTYSKENEQLVKQSWEILKKDAQRNGINFFRKVFEIAPGAKAMYSFLRDSTIPFEENPKVKNHARYVFMMTGDAAVQLGEKGAYQVLESKLQKLAATHVNAGVTDDQFEIVKEAILYAIEMGVPDLWSPELKSAWGDAYDMLAEQVKAEM 171          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBPA_CASGL (Hemoglobin A OS=Casuarina glauca GN=SYMA PE=2 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37
Identity = 79/150 (52.67%), Postives = 102/150 (68.00%), Query Frame = -3
Query:  201 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMK 650
            A TE QEAL+ +SW V+K+N     L+ F  I E AP ++ +FSFL+DSN   E N KLK HA  +F   CESA +LR+ G+     +TLK+LG++H K  + + HFEV K +LL TIKEAV E WS EM  AW+EAY+QLVA IK+EMK
Sbjct:    2 ALTERQEALLKQSWEVLKQNIPGHSLRLFALIIEAAPESKYVFSFLKDSNEIPENNPKLKAHAAVIFKTICESATELRQKGQAVWDNNTLKRLGSIHLKNKITDPHFEVMKGALLGTIKEAVKENWSDEMGCAWTEAYNQLVATIKAEMK 151          
The following BLAST results are available for this feature:
BLAST of CN187565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HBL_HORVU1.182e-6073.03Non-symbiotic hemoglobin OS=Hordeum vulgare GN=HB ... [more]
HBL1_ORYSJ5.865e-6072.55Non-symbiotic hemoglobin 1 OS=Oryza sativa subsp. ... [more]
HBL3_ORYSJ1.035e-5669.28Non-symbiotic hemoglobin 3 OS=Oryza sativa subsp. ... [more]
HBL4_ORYSJ1.265e-5466.89Non-symbiotic hemoglobin 4 OS=Oryza sativa subsp. ... [more]
HBL2_SOLLC2.096e-4156.76Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum... [more]
HBL2_GOSHI3.574e-4157.33Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum G... [more]
HBL2_ARATH6.097e-4154.36Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana... [more]
HBL2_BRANA1.358e-4053.69Non-symbiotic hemoglobin 2 OS=Brassica napus GN=HB... [more]
HBL0_PHYPA3.699e-3848.00Non-symbiotic hemoglobin 0 OS=Physcomitrella paten... [more]
HBPA_CASGL6.976e-3752.67Hemoglobin A OS=Casuarina glauca GN=SYMA PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004K15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004K15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187565 ID=CN187565; Name=CN187565; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTCAAACATTAGGAACAAACTTTTGTTATCACATTT
TCAAGAGTTGAACACAAGAGATTATACAAAAAGGCACAAGAAACACACGT
GGGTACCAATGCAAAGATTAACAAATAAACAATGCTCTTTTTGAAATTCT
TTAATATTACAGGGGAAGAGAAATTTGTTCAGGAAACTCTAAGAGGAGGG
CTTCATCTCCGACTTAATGGCTGCAACCAATTGGTCGTAAGCTTCTGACC
AGGCACTCTTCATTTCTGGCGACCACATCTCTGGTACTGCCTCTTTTATG
GTTTCCAGTAGTGAAAATTTTGTGACCTCAAAATGCTCATTAACAACACC
ATATTTGAAGTGGACAGCTCCTAATTTTTTTAGAGTTGATTCTCTTACTG
TCACTTTGCCTGCTTTCCTCAGTTGCACTGCTGATTCACACGTCATAACA
AAAACAGACATGGCATGGGTCTTGAGCTTCTGGTTCTGCTCTAGAGGCAC
ATTTGAGTCTCTCAAGAATGAGAACAGCTTTTGGGCTGATGGTGCAATCT
CAAAGATCCTCAAGAAGAATTTAAGACCCAATTCTCCAGCATTCTTCTTC
ATTACATTCCATGACTTGACAACTAAAGCTTCTTGCTCTTCAGTAAAGGC
TCTACCTTCGTTAATGTTGGCCATTGATTTCTATTTGGACACCTGAGGAT
TGAATGTGA
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