CN187565

Overview
NameCN187565
Unique NameCN187565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: HBP1_CASGL (Hemoglobin-1 OS=Casuarina glauca PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = -3
Query:  201 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMK 650
            A TE+QEAL+ +SW V+K+N     L+ F  I E AP ++ +FSFL+DSN   E N KLK HA  +F   CESA +LR+ G      +TLK+LG++H K  + + HFEV K +LL TIKEA+ E WS EM  AW+EAY+QLVA IK+EMK
Sbjct:    2 ALTEKQEALLKQSWEVLKQNIPAHSLRLFALIIEAAPESKYVFSFLKDSNEIPENNPKLKAHAAVIFKTICESATELRQKGHAVWDNNTLKRLGSIHLKNKITDPHFEVMKGALLGTIKEAIKENWSDEMGQAWTEAYNQLVATIKAEMK 151          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: LGB_CANLI (Leghemoglobin OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29
Identity = 72/149 (48.32%), Postives = 95/149 (63.76%), Query Frame = -3
Query:  204 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 650
            AF+E+QE+LV  SW   K+N       F+  I E AP+AQ +FSFL +   P   N KLK HA  VF MT +SAVQLR  G+V + + TL   G+VH + GV++ HF V K +LL+T KEAV + W+ E+ +AW  AYD+L AAIK  M
Sbjct:    3 AFSEKQESLVKSSWEAFKQNVPHHSAVFYTLILEKAPAAQNMFSFLSNGVDP--NNPKLKAHAEKVFKMTVDSAVQLRAKGEVVLADPTL---GSVHVQKGVLDPHFLVVKEALLKTFKEAVGDKWNDELGNAWEVAYDELAAAIKKAM 146          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: LGB2_LUPLU (Leghemoglobin-2 OS=Lupinus luteus PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 68/153 (44.44%), Postives = 96/153 (62.75%), Query Frame = -3
Query:  192 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 650
            A TE Q ALV  SW     N  +   +FF+ + EIAP+A+ LFSFL+ ++   + N +L+ HA  VF +  E+A+QL+  G V V ++TLK LG+VH   GV + HF V K ++L+TIKE V   WS E+ SAW+ AYD+L   IK EM  ++
Sbjct:    3 ALTESQAALVKSSWEEFNANIPKHTHRFFILVLEIAPAAKDLFSFLKGTSEVPQNNPELQAHAGKVFKLVYEAAIQLQVTG-VVVTDATLKNLGSVHVSKGVADAHFPVVKEAILKTIKEVVGAKWSEELNSAWTIAYDELAIVIKKEMNDAA 154          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: LGB2_MEDTR (Leghemoglobin 2 OS=Medicago truncatula GN=LB2 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29
Identity = 72/148 (48.65%), Postives = 98/148 (66.22%), Query Frame = -3
Query:  204 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 647
            FTE+QEALV  SW + K+N G   L F+  I E AP+A+ +FSFL+D+   ++ + KL++HA  VF M  +SAVQLR  G V + ++TL   GA+H + GVV+ HF V K +LL+TIKE   + WS E+ +AW  AYD L AAIK  M
Sbjct:    3 FTEKQEALVNSSWELFKQNPGNSVL-FYTIILEKAPAAKGMFSFLKDT-AGVQDSPKLQSHAEKVFGMVRDSAVQLRATGGVVLGDATL---GAIHIQKGVVDPHFVVVKEALLKTIKEVSGDKWSEELSTAWEVAYDALAAAIKKAM 145          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: LGB3_PEA (Leghemoglobin Lb120-1 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 71/148 (47.97%), Postives = 98/148 (66.22%), Query Frame = -3
Query:  204 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 647
            FTE+QEALV  SW + K+N     + F+  I + AP+A+ +FSFL+DS   +  + KL+ HA  VF M  +SA+QLR +G+V V ++TL   GA+H + GVV+ HF V K +LLETIKEA  E WS E+ +AW  AY+ L +AIK  M
Sbjct:    3 FTEKQEALVNSSWELFKQNPS-YSVLFYTIILKKAPAAKGMFSFLKDS-AEVVDSPKLQAHAEKVFGMVHDSAIQLRASGEVVVGDATL---GAIHIQKGVVDPHFVVVKEALLETIKEASGEKWSEELSTAWEVAYEGLASAIKKAM 145          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: LGB4_MEDSA (Leghemoglobin OS=Medicago sativa GN=LB3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 68/148 (45.95%), Postives = 97/148 (65.54%), Query Frame = -3
Query:  204 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 647
            FT +QEALV  SW   K+N     + F+  I E AP+A+ +FSFL+DS   ++ + +L+ HA  VF M  +SAVQLR  G+V + ++TL   G++H + GVV+ HF V K +LL+TIKEAV + WS E+ ++W  AYD L +AIK  M
Sbjct:    3 FTADQEALVNSSWESFKQNLPGYSVFFYTTILEKAPAAKGMFSFLKDS-AGVQDSPQLQAHAEKVFGMVRDSAVQLRATGEVVLGDATL---GSIHIQKGVVDPHFVVVKEALLKTIKEAVGDKWSEELSTSWEVAYDGLASAIKKAM 146          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: LGB6_PEA (Leghemoglobin Lb120-34 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28
Identity = 70/148 (47.30%), Postives = 98/148 (66.22%), Query Frame = -3
Query:  204 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 647
            FTE+QEALV  SW + K+N     + F+  I + AP+A+ +FSFL+DS   +  + KL+ HA  VF M  +SA+QLR +G+V + ++TL   GA+H + GVV+ HF V K +LLETIKEA  E WS E+ +AW  AY+ L +AIK  M
Sbjct:    3 FTEKQEALVNSSWELFKQNPS-YSVLFYTIILKKAPAAKGMFSFLKDS-AEVVDSPKLQAHAEKVFGMVHDSAIQLRASGEVVLGDATL---GAIHIQKGVVDPHFVVVKEALLETIKEASGEKWSEELSTAWEVAYEGLASAIKKAM 145          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: LGB1_MEDSA (Leghemoglobin-1 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 67/149 (44.97%), Postives = 96/149 (64.43%), Query Frame = -3
Query:  204 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 650
            +FT++QEALV  SW   K+N     + F+  + E AP+A+ LFSFL++S   ++ + +L+ HA  VF +  +SAVQLR  G V + ++TL   GA+H + GVV+ HF V K +LL+TIKEA  + WS E+ +AW  AYD L  AIK  M
Sbjct:    2 SFTDKQEALVNSSWEAFKQNLPRYSVFFYTVVLEKAPAAKGLFSFLKNS-AEVQDSPQLQAHAEKVFGLVRDSAVQLRATGGVVLGDATL---GAIHVRKGVVDPHFVVVKEALLKTIKEAAGDKWSEELNTAWEVAYDALATAIKKAM 146          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: LGB5_PEA (Leghemoglobin Lb120-29 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27
Identity = 70/148 (47.30%), Postives = 98/148 (66.22%), Query Frame = -3
Query:  204 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 647
            FT++QEALV  SW + K+N G   + F+  I + AP+ + +FSFL+DS   +  + KL+ HA  VF M  +SAVQLR +G+V + ++TL   GA+H + GVV+ HF V K +LLETIKEA  E WS E+ +AW  AY+ L +AIK  M
Sbjct:    3 FTDKQEALVNSSWELFKQNPG-YSVLFYNIILKKAPATKGMFSFLKDS-AGVVDSPKLQAHAEKVFGMVHDSAVQLRVSGEVVLGDATL---GAIHIQKGVVDSHFVVVKEALLETIKEASGEKWSEELSTAWEVAYEGLASAIKKAM 145          
BLAST of CN187565 vs. ExPASy Swiss-Prot
Match: LGB3_MEDSA (Leghemoglobin-3 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27
Identity = 70/148 (47.30%), Postives = 95/148 (64.19%), Query Frame = -3
Query:  204 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 647
            FT++QEALV  SW   K+N G   L F+  I E AP+A+ +FSFL+DS   ++ + KL++HA  VF M  +SA QLR  G V + ++TL   GA+H + GVV+ HF V K +LL+TIKE   + WS E+ +AW  AYD L  AIK  M
Sbjct:    3 FTDKQEALVNSSWESFKQNPGNSVL-FYTIILEKAPAAKGMFSFLKDS-AGVQDSPKLQSHAEKVFGMVRDSAAQLRATGGVVLGDATL---GAIHIQKGVVDPHFAVVKEALLKTIKEVSGDKWSEELNTAWEVAYDALATAIKKAM 145          
The following BLAST results are available for this feature:
BLAST of CN187565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HBP1_CASGL6.976e-3752.00Hemoglobin-1 OS=Casuarina glauca PE=1 SV=2[more]
LGB_CANLI1.079e-2948.32Leghemoglobin OS=Canavalia lineata PE=2 SV=1[more]
LGB2_LUPLU2.403e-2944.44Leghemoglobin-2 OS=Lupinus luteus PE=1 SV=2[more]
LGB2_MEDTR9.132e-2948.65Leghemoglobin 2 OS=Medicago truncatula GN=LB2 PE=2... [more]
LGB3_PEA2.034e-2847.97Leghemoglobin Lb120-1 OS=Pisum sativum PE=2 SV=3[more]
LGB4_MEDSA3.470e-2845.95Leghemoglobin OS=Medicago sativa GN=LB3 PE=2 SV=1[more]
LGB6_PEA4.532e-2847.30Leghemoglobin Lb120-34 OS=Pisum sativum PE=2 SV=3[more]
LGB1_MEDSA5.919e-2844.97Leghemoglobin-1 OS=Medicago sativa PE=2 SV=1[more]
LGB5_PEA1.010e-2747.30Leghemoglobin Lb120-29 OS=Pisum sativum PE=2 SV=3[more]
LGB3_MEDSA1.319e-2747.30Leghemoglobin-3 OS=Medicago sativa PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004K15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004K15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187565 ID=CN187565; Name=CN187565; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTCAAACATTAGGAACAAACTTTTGTTATCACATTT
TCAAGAGTTGAACACAAGAGATTATACAAAAAGGCACAAGAAACACACGT
GGGTACCAATGCAAAGATTAACAAATAAACAATGCTCTTTTTGAAATTCT
TTAATATTACAGGGGAAGAGAAATTTGTTCAGGAAACTCTAAGAGGAGGG
CTTCATCTCCGACTTAATGGCTGCAACCAATTGGTCGTAAGCTTCTGACC
AGGCACTCTTCATTTCTGGCGACCACATCTCTGGTACTGCCTCTTTTATG
GTTTCCAGTAGTGAAAATTTTGTGACCTCAAAATGCTCATTAACAACACC
ATATTTGAAGTGGACAGCTCCTAATTTTTTTAGAGTTGATTCTCTTACTG
TCACTTTGCCTGCTTTCCTCAGTTGCACTGCTGATTCACACGTCATAACA
AAAACAGACATGGCATGGGTCTTGAGCTTCTGGTTCTGCTCTAGAGGCAC
ATTTGAGTCTCTCAAGAATGAGAACAGCTTTTGGGCTGATGGTGCAATCT
CAAAGATCCTCAAGAAGAATTTAAGACCCAATTCTCCAGCATTCTTCTTC
ATTACATTCCATGACTTGACAACTAAAGCTTCTTGCTCTTCAGTAAAGGC
TCTACCTTCGTTAATGTTGGCCATTGATTTCTATTTGGACACCTGAGGAT
TGAATGTGA
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