CN187557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.178e-47 Identity = 86/137 (62.77%), Postives = 112/137 (81.75%), Query Frame = 3 Query: 60 NAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 470 NA SGM V D+ K FLEL+ K+T+R++VFKI+E +K+VVVEK G P++SY++F ASLP ++CRYAVYDFDFVT ENCQKSKI F AWSP TS +R+K++Y++SKD+ REL GI E+QATDPTE+ L+V+R R N Sbjct: 10 NAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERAN 146
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.208e-46 Identity = 79/143 (55.24%), Postives = 119/143 (83.22%), Query Frame = 3 Query: 42 FLQKMANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 470 F++ ANA+SG+ V +CK FLEL+ K+++R+++FKI++K K+VVVEK G ++S+++F SLP +CRYA+YDFDFVT+ENCQKSKI F+AWSP S++R+KM+YA+SK+RF+RELDG+ E+QATDP+E+ ++++R R + Sbjct: 3 FVRSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERAH 145
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.289e-44 Identity = 79/137 (57.66%), Postives = 114/137 (83.21%), Query Frame = 3 Query: 54 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 464 MAN++SG+A+ DDCKLKF EL++KR +RFI F ++ K K+++V+K+G+ + SYE+FT+SLP +CR+A+YDFDF+T E+ KS+I +I WSPD +KVRSKM+YASS +RFK+EL+GIQ+E+QATD E+ LD ++ R Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.101e-43 Identity = 80/137 (58.39%), Postives = 114/137 (83.21%), Query Frame = 3 Query: 54 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 464 MANA SG+AV+D+C LKF EL++KR +RFI FK+++K K++VV+++G+ + SY++FT SLP ++CRYA+YDFDFVT E+ QKS+I +I WSP ++KV+SKM+YASS +FK L+GIQVELQATD +E+ LD ++ R Sbjct: 1 MANARSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDR 137
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF5_ARATH (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.805e-42 Identity = 77/134 (57.46%), Postives = 106/134 (79.10%), Query Frame = 3 Query: 63 AASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 464 A +GM V D+C F+++K K+ +R+IVFKIEEK ++V V+K+G +SY + SLP D+CRYAV+DFDFVT +NC+KSKI FIAWSP+ SK+R+K++YA+SKD +R L+GI ELQATDPTEMG D+++ R Sbjct: 8 ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDR 141
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.528e-41 Identity = 72/130 (55.38%), Postives = 106/130 (81.54%), Query Frame = 3 Query: 81 VDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 470 V + K F ELK ++ +R+++FKI+++++++VVEK G P +SY++FTASLPAD+CRYAVYD DFV+D+NC+KSKI FI+WSP S++R+K IYA S+++F+ ELDG+ E+QATDP +M L+V+R R N Sbjct: 20 VPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.293e-40 Identity = 73/134 (54.48%), Postives = 104/134 (77.61%), Query Frame = 3 Query: 63 AASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 464 A GM V ++C+ F+E+K K+ +RF+V+KI+E+ + V+V+K+G P + YE A+LP D+CRYAV+DFDFVT +NCQKSKI FIAWSP S++R+K++YA+SK +R LDG+ E+QATD +EMG DV+R R Sbjct: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGR 141
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.095e-39 Identity = 70/126 (55.56%), Postives = 99/126 (78.57%), Query Frame = 3 Query: 87 DDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 464 DDCK F+E+K K+ +R++V+K+EEK ++V V+K+G +SY++ ASLP D+CRYAV+DFD+VT +NC+ SKI FI WSP+ S++R KM+YA+SK +R LDG+ ELQATDPTEMG D ++ R Sbjct: 3 DDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDR 128
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.186e-39 Identity = 76/150 (50.67%), Postives = 107/150 (71.33%), Query Frame = 3 Query: 54 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDE-----------NCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 470 MANA SG+AV ++CK +F EL+A R +RF+VFKI++ +QVVV+++G ++ TASLPAD CRYAVYD DF + +SKI F++WSP + VRSKM+YASS + FK+ELDG+Q++LQATDP+E+ LDV++ T+ Sbjct: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKDHTS 150
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF11_ARATH (Putative actin-depolymerizing factor 11 OS=Arabidopsis thaliana GN=ADF11 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.982e-37 Identity = 83/138 (60.14%), Postives = 98/138 (71.01%), Query Frame = 3 Query: 75 MAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKL------GEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 470 M + DDCKL FLELK +RT+R IV+KIE+ QV+VEK GE SYE F SLPADECRYA+ D +FV E KI FIAWSP T+K+R KMIY+S+KDRFKRELDGIQVE ATD T++ LD +R R N Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNM-QVIVEKHHYKKMHGEREQSYEEFANSLPADECRYAILDIEFVPGER----KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRRIN 133 The following BLAST results are available for this feature:
BLAST of CN187557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187557 ID=CN187557; Name=CN187557; organism=Citrus sinensis; type=EST; length=806bpback to top |