CN187557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COFI_KLULA (Cofilin OS=Kluyveromyces lactis GN=COF1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.100e-23 Identity = 52/128 (40.62%), Postives = 85/128 (66.41%), Query Frame = 3 Query: 69 SGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDEN-CQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLD 449 SG+AV D+ F +LK + Y+FI++ + + + +++V++ D Y+ F LP ++C YAVYDF++ N ++SKI+F WSPDT+ VRSKM+YASSKD +R L+G+ ++Q TD +E+ + Sbjct: 4 SGVAVADESLNAFNDLKLGKKYKFILYALNDSKTEIIVKETSAEQD-YDKFLEQLPENDCLYAVYDFEYELGNNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSSDIQGTDFSEVAYE 130
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COFI_ASHGO (Cofilin OS=Ashbya gossypii GN=COF1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.876e-23 Identity = 51/128 (39.84%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 69 SGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDF-VTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLD 449 SG+AV D+ F +LK + Y+F++F + + ++V++ D Y+ F LP D+C YAVYDF++ ++ ++SKI+F WSPDT+ +RSKM+YASSKD +R L+G+ ++Q TD +E+ + Sbjct: 4 SGVAVADESLTAFNDLKLGKKYKFVLFGLNADKTSIIVKETSNERD-YDVFLEKLPEDDCLYAVYDFEYEISGAEGKRSKIVFFTWSPDTAPIRSKMVYASSKDALRRALNGVSSDIQGTDFSEVAYE 130
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COFI_CRYNE (Cofilin OS=Cryptococcus neoformans GN=COF1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.200e-23 Identity = 53/131 (40.46%), Postives = 85/131 (64.89%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDF-VTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVM 455 +SG+ +C KF ELK + ++++ + E ++ +VV K E D +++F A LP +CR+AVYDF+F + ++K+ FI WSPD + V++KMI+ASSK+ +R LDGI E+QATD +E+ D + Sbjct: 2 SSGVQPTQECLEKFQELKTGKKLTYVIYGLSEDKRSIVVLKASEDKD-FDSFVAELPEKDCRWAVYDFEFTLPGGEGVRNKLCFIVWSPDDASVKNKMIFASSKEAIRRRLDGIHTEIQATDFSEITKDAL 131
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COF1_DICDI (Cofilin-1 OS=Dictyostelium discoideum GN=cofA PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.459e-23 Identity = 51/125 (40.80%), Postives = 80/125 (64.00%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEM 440 +SG+A+ +C F +LK R Y I+++I + K+++V+ S++ FT LP +ECRY V D+ + +E QKSKI F+AW PDT+ ++ KM+ SSKD ++ GIQVE+Q TD +E+ Sbjct: 2 SSGIALAPNCVSTFNDLKLGRKYGGIIYRISDDSKEIIVDSTLPAGCSFDEFTKCLPENECRYVVLDYQY-KEEGAQKSKICFVAWCPDTANIKKKMMATSSKDSLRKACVGIQVEIQGTDASEV 125
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: CADF_DROME (Cofilin/actin-depolymerizing factor homolog OS=Drosophila melanogaster GN=tsr PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.138e-20 Identity = 49/141 (34.75%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPA---DECRYAVYDFDFV-----TDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 464 ASG+ V D CK + E+K + +R+++F I + +KQ+ VE + + + Y+ F + ECRY ++DF+++ T E+ +K K+ ++W PDT+KV+ KM+Y+SS D K+ L G+Q +QATD +E + + + Sbjct: 2 ASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRD-EKQIDVETVADRNAEYDQFLEDIQKCGPGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASREAVEEK 141
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COFI_GIBZE (Cofilin OS=Gibberella zeae GN=COF1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.246e-19 Identity = 53/132 (40.15%), Postives = 78/132 (59.09%), Query Frame = 3 Query: 90 DCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADEC-----------RYAVYDFDF-VTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLD 449 DC F +LK + Y+FIV+K+ + K++V++K E D +E+F +L RYAVYDF++ + + ++KI FIAWSPD + ++ KMIYASSK+ KR L GI ELQA D ++ D Sbjct: 2 DCITAFNDLKLNKKYKFIVYKLSDDYKEIVIDKASESRD-WEDFRETLVNATAKSRTGAVGKGPRYAVYDFEYNLASGDGIRNKITFIAWSPDDAGIQPKMIYASSKEALKRSLTGIATELQANDTDDIEYD 132
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COF2_XENLA (Cofilin-2 OS=Xenopus laevis GN=cfl2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.972e-17 Identity = 53/151 (35.10%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVVVEK--------LGEP-SDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 464 ASG+ V+D+ F E+K K+ + ++F + +K+++VE+ +GE D Y F LP D+CRY +YD + T E+ +K ++FI W+PD + ++SKMIYASSKD K++ GI+ E Q GLD ++ R Sbjct: 2 ASGVTVNDEVIKVFNEMKVRKSSTPEEIKKRKKAVLFCLSPDKKEIIVEETKQILVGDIGEAVQDPYRTFVNLLPLDDCRYGLYDATYETKES-KKEDLVFIFWAPDNAPLKSKMIYASSKDAIKKKFTGIKHEWQVN-----GLDDIKDR 146
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COF2_XENTR (Cofilin-2 OS=Xenopus tropicalis GN=cfl2 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.302e-16 Identity = 53/151 (35.10%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVVVEK--------LGEP-SDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 464 ASG+ V+D+ F E+K K+ + ++F + +K+++VE+ +GE D Y F LP D+CRY +YD + T E+ +K ++FI W+PD + ++SKMIYASSKD K++ GI+ E Q GLD ++ R Sbjct: 2 ASGVTVNDEVIKVFNEMKVRKSSTPEEIKKRKKAVLFCLSPDKKEIIVEETKQILVGDIGEAVPDPYRTFVNLLPLDDCRYGLYDATYETKES-KKEDLVFIFWAPDNAPLKSKMIYASSKDAIKKKFTGIKHEWQVN-----GLDDIKDR 146
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COF1_RAT (Cofilin-1 OS=Rattus norvegicus GN=Cfl1 PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 2.222e-16 Identity = 50/137 (36.50%), Postives = 79/137 (57.66%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVVVEKLGE---------PSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQA 422 ASG+AV D F ++K K+ + ++F + E +K +++E+ E D Y F LP +CRYA+YD + T E+ +K ++FI W+P+++ ++SKMIYASSKD K++L GI+ ELQA Sbjct: 2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYTTFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIKHELQA 137
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COF1_HUMAN (Cofilin-1 OS=Homo sapiens GN=CFL1 PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 2.222e-16 Identity = 50/137 (36.50%), Postives = 79/137 (57.66%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVVVEKLGE---------PSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQA 422 ASG+AV D F ++K K+ + ++F + E +K +++E+ E D Y F LP +CRYA+YD + T E+ +K ++FI W+P+++ ++SKMIYASSKD K++L GI+ ELQA Sbjct: 2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIKHELQA 137 The following BLAST results are available for this feature:
BLAST of CN187557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187557 ID=CN187557; Name=CN187557; organism=Citrus sinensis; type=EST; length=806bpback to top |