CN187557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COF1_XENTR (Cofilin-1 OS=Xenopus tropicalis GN=cfl1 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 4.190e-15 Identity = 48/136 (35.29%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLELK---------AKRTYRFIVFKIEEKQKQVVVEKLGE---------PSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQ 419 ASG+ V DD F ++K AK+ + +VF + E +K +++E E D Y+ F LP ++CRYA+YD + T E +K ++F+ W+P+ + ++SKMIYASSKD K+ GI+ E Q Sbjct: 2 ASGVMVSDDVIKVFNDMKVRHQLSPEEAKKRKKAVVFCLSEDKKMIILEPGKEILQGDVGCNVDDPYKAFVKMLPRNDCRYALYDALYETKET-KKEDLVFVFWAPEEASLKSKMIYASSKDAIKKRFPGIKHEWQ 136
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: COF1B_XENLA (Cofilin-1-B OS=Xenopus laevis GN=cfl1-B PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14 Identity = 45/136 (33.09%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLELK---------AKRTYRFIVFKIEEKQKQVVVEKLGE---------PSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQ 419 ASG+ V DD F ++K AK+ + ++F + + +K +++E E D Y+ F LP ++CRYA+YD + T E +K ++F+ W+P+ + ++SKMIYASSKD ++ GI+ E Q Sbjct: 2 ASGVMVSDDVVKVFNDMKVRHQLSPEEAKKRKKAVIFCLSDDKKTIILEPGKEILQGDVGCNVEDPYKTFVKMLPRNDCRYALYDALYETKET-KKEDLVFVFWAPEEASLKSKMIYASSKDAIRKRFTGIKHEWQ 136
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF2_CAEEL (Actin-depolymerizing factor 2, isoform c OS=Caenorhabditis elegans GN=unc-60 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.946e-12 Identity = 44/137 (32.12%), Postives = 73/137 (53.28%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASL-----PADECRYAVYDFDFVTDENCQK-----SKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQ--VELQATDPTEM 440 ASG+ VD CK + L K + +I+FKI++ +VVEK+GE + Y F + ECRYA D + + +K+IF+ + PD + VR +M+YASS K L G++ ++QA++ +++ Sbjct: 2 ASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDL 137
BLAST of CN187557 vs. ExPASy Swiss-Prot
Match: ADF1_CAEEL (Actin-depolymerizing factor 1, isoforms a/b OS=Caenorhabditis elegans GN=unc-60 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11 Identity = 46/148 (31.08%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 66 ASGMAVDDDCKLKFLEL-KAKRTYRFIVFKIEEK----QKQVVVEKLGEPSDSYENFTASL-------------PADECRYAVYDFDFVTDE----NCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKREL-DGIQVELQATDPTEM 440 +SG+ VD D + F +L + ++ YR+I+FKI+E + V ++LG D Y++ + + +CRYAV+DF F + KIIF+ PD + ++ KM+YASS K L G ++ Q +D +EM Sbjct: 2 SSGVMVDPDVQTSFQKLSEGRKEYRYIIFKIDENKVIVEAAVTQDQLGITGDDYDDSSKAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEM 149 The following BLAST results are available for this feature:
BLAST of CN187557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187557 ID=CN187557; Name=CN187557; organism=Citrus sinensis; type=EST; length=806bpback to top |