CN187556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187556 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34 Identity = 62/116 (53.45%), Postives = 89/116 (76.72%), Query Frame = -1 Query: 345 KRTYRFIVFKMXXXXXXXXXXKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 692 ++ +R+++FK+ K G P +SY++FTASLPAD+CRYAVYD DFV+D+NC+KSKI FI+WSP S++R+K IYA S+++F+ ELDG+ E+QATDP +M L+V+R R N Sbjct: 34 RKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149
BLAST of CN187556 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.556e-33 Identity = 64/116 (55.17%), Postives = 89/116 (76.72%), Query Frame = -1 Query: 345 KRTYRFIVFKMXXXXXXXXXXKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 692 K+ +R+++FK+ K G ++SY++F ASLP ++CRYA+YDFDFVT EN QKSKI FIAWSP TS++R+KM+Y++SKDR K+ELDG E+QATDPTE+ L+V+R R + Sbjct: 30 KKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERAH 145
BLAST of CN187556 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.556e-33 Identity = 59/116 (50.86%), Postives = 91/116 (78.45%), Query Frame = -1 Query: 345 KRTYRFIVFKMXXXXXXXXXXKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 692 K+++R+++FK+ K G ++S+++F SLP +CRYA+YDFDFVT+ENCQKSKI F+AWSP S++R+KM+YA+SK+RF+RELDG+ E+QATDP+E+ ++++R R + Sbjct: 30 KKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERAH 145
BLAST of CN187556 vs. ExPASy Swiss-Prot
Match: ADF5_ARATH (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.535e-32 Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = -1 Query: 351 KRTYRFIVFKMXXXXXXXXXXKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 692 K+ +R+IVFK+ K+G +SY + SLP D+CRYAV+DFDFVT +NC+KSKI FIAWSP+ SK+R+K++YA+SKD +R L+GI ELQATDPTEMG D+++ R Sbjct: 28 KKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDR 141
BLAST of CN187556 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.243e-31 Identity = 61/114 (53.51%), Postives = 83/114 (72.81%), Query Frame = -1 Query: 351 KRTYRFIVFKMXXXXXXXXXXKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 692 K+ +RF+V+K+ K+G P + YE A+LP D+CRYAV+DFDFVT +NCQKSKI FIAWSP S++R+K++YA+SK +R LDG+ E+QATD +EMG DV+R R Sbjct: 28 KKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGR 141
BLAST of CN187556 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.233e-30 Identity = 62/115 (53.91%), Postives = 86/115 (74.78%), Query Frame = -1 Query: 351 AKRTYRFIVFKMXXXXXXXXXXKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 695 +KR +RFI F M K+G+ + SYE+FT+SLP +CR+A+YDFDF+T E+ KS+I +I WSPD +KVRSKM+YASS +RFK+EL+GIQ+E+QATD E+ LD ++ R Sbjct: 23 SKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137
BLAST of CN187556 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 62/115 (53.91%), Postives = 86/115 (74.78%), Query Frame = -1 Query: 351 AKRTYRFIVFKMXXXXXXXXXXKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 695 +KR +RFI FKM ++G+ + SY++FT SLP ++CRYA+YDFDFVT E+ QKS+I +I WSP ++KV+SKM+YASS +FK L+GIQVELQATD +E+ LD ++ R Sbjct: 23 SKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDR 137
BLAST of CN187556 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.117e-30 Identity = 58/114 (50.88%), Postives = 82/114 (71.93%), Query Frame = -1 Query: 351 KRTYRFIVFKMXXXXXXXXXXKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 692 K+ +R++V+K+ K+G +SY++ ASLP D+CRYAV+DFD+VT +NC+ SKI FI WSP+ S++R KM+YA+SK +R LDG+ ELQATDPTEMG D ++ R Sbjct: 15 KKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDR 128
BLAST of CN187556 vs. ExPASy Swiss-Prot
Match: ADF8_ORYSJ (Putative actin-depolymerizing factor 8 OS=Oryza sativa subsp. japonica GN=ADF8 PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27 Identity = 58/116 (50.00%), Postives = 83/116 (71.55%), Query Frame = -1 Query: 345 KRTYRFIVFKMXXXXXXXXXXKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 692 ++ +R+++FK+ K G P +SY++FTASLPAD AVYD DFV+D+NC+KSKI FI+WSP S +R+K IYA +++F+ ELDG+ E+QATDP +M L+V+R R N Sbjct: 33 RKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLPAD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 144
BLAST of CN187556 vs. ExPASy Swiss-Prot
Match: ADF11_ARATH (Putative actin-depolymerizing factor 11 OS=Arabidopsis thaliana GN=ADF11 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.267e-27 Identity = 65/121 (53.72%), Postives = 78/121 (64.46%), Query Frame = -1 Query: 345 KRTYRFIVFKMXXXXXXXXXXKL-----GEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 692 +RT+R IV+K+ GE SYE F SLPADECRYA+ D +FV E KI FIAWSP T+K+R KMIY+S+KDRFKRELDGIQVE ATD T++ LD +R R N Sbjct: 17 RRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSLPADECRYAILDIEFVPGER----KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRRIN 133 The following BLAST results are available for this feature:
BLAST of CN187556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187556 ID=CN187556; Name=CN187556; organism=Citrus sinensis; type=EST; length=695bpback to top |