CN187554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187554 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.940e-27 Identity = 68/151 (45.03%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 84 RKTNVFDPFSLDVWDPFDGFFSSALTNVPSTARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQE---EKNDKWHRVERSSGKFLRRFRLPDNAKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 527 R NV DP S+D W D F + V S A N R+DWKETP AHVF ADLPG+R G +L ISGER++E++ + +++WH VERSSGKF RRFRLP A+++QV ASM+NG AI ISG Sbjct: 5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
BLAST of CN187554 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.434e-23 Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 3 Query: 204 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKMEQVKASMENG 458 AR+DWKETP+ HV D+PGL+ R+L++SGER KE+E+K D WHRVERS GKF R+FRLP N ++ VKA +ENG Sbjct: 67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENG 151
BLAST of CN187554 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.434e-23 Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 3 Query: 198 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKMEQVKASMENG 458 ++AR+DWKETP+ HV D+PGL+ R+L++SGER KE+++K D WHRVERS GKF R+F+LP N ++ VKA MENG Sbjct: 73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENG 159
BLAST of CN187554 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.205e-22 Identity = 54/129 (41.86%), Postives = 78/129 (60.47%), Query Frame = 3 Query: 78 GGRKTNVFDPFSLDVWDPF-DGFFSSALTNVPSTARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKMEQVKASMENG 458 GG +P S+D+ +PF D +A PS A + + A +DWKET AHVF AD+PG+R ++L+ISG+R++ EEK ++WHRVERSS +F+R RLP NA + V A+++NG Sbjct: 26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNG 154
BLAST of CN187554 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.467e-22 Identity = 55/121 (45.45%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 117 DVW-----DPFDGFFSSALTNVP-STARETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKMEQVKASMENG 458 D+W DPF L +P R+TS + AR+DWKET + H D+PGL+ +L++SGER +E+E+K D+WHRVERS GKF R+F+LPDN ME VKA +ENG Sbjct: 40 DLWLDRFPDPF-----KILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENG 155
BLAST of CN187554 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.658e-19 Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 3 Query: 306 ILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 527 ILQISGER+ E+E+KND WHRVERSSGKF+R FRLPDNAK++QVKASMENG AIEISG Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CN187554 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.658e-19 Identity = 50/122 (40.98%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 96 VFDPFSLDVWDPFDGFFSSALTNVPSTARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKMEQVKASMENG 458 +FD + D W+PF F + + A +TS FAN I+ +ET +A+VF+ADLP G++ G +L I+GERS +EEK + H +ERS F RF LPD+A ++ V+ASM+ G Sbjct: 6 LFDTLAFDAWNPFS-IFGTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGG 126
BLAST of CN187554 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.180e-16 Identity = 42/96 (43.75%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 183 ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQ--EEKN--DKWHRVERSSGKFLRRFRLPDNAKMEQVKASMENG 458 + + + AR+DW+ET AH D+PG+R R+L+ISGER +E+ E+K D WHR ERS G+F R+ RLPDNA ++ + AS++NG Sbjct: 69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNG 164
BLAST of CN187554 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.225e-15 Identity = 50/145 (34.48%), Postives = 77/145 (53.10%), Query Frame = 3 Query: 48 PIMSLIPSIFGGRKTNVFDPFSLDVWDPFDGFFSSALTNVPSTARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXG-RILQISGER-----SKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKMEQVKASMENG 458 P +L+P +G + F P G ++A P+ A AR DWKETP+AHV D+PG+R R+L++SGER ++E+E + D +WHR ER++G+F RRFR+P A + +V A +++G Sbjct: 26 PAAALVPYGYGYMLDDPFRVLEQSPLRPAGGVAAAAAAGEPAAV------ALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDG 164
BLAST of CN187554 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 3 Query: 198 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSS-----GKFLRRFRLPDNAKMEQVKASMENG 458 + A IDW E+ +H+FK ++PG G +L I GE KE++++N WH ER + +FLRR LP+N K++QVKA +ENG Sbjct: 20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENG 111 The following BLAST results are available for this feature:
BLAST of CN187554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187554 ID=CN187554; Name=CN187554; organism=Citrus sinensis; type=EST; length=759bpback to top |