CK938083

Overview
NameCK938083
Unique NameCK938083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUV92_BOVIN (Histone-lysine N-methyltransferase SUV39H2 OS=Bos taurus GN=SUV39H2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.990e-27
Identity = 66/190 (34.74%), Postives = 95/190 (50.00%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTENK-GWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY--------------HYELLSGEGYPCHCGASKCRGRL 530
            N  C C   CPNR+++ G +  L +F+T N  GW V+    I R +FV EY+GEV+   E  +R   Y   G  Y+ ++    ++          + +DA +YGNVS F+NHSC PNL    V ++++D +   I L+++R I  GEELT+DY              H          C CGA  CRG L
Sbjct:  230 NSRCQCGPDCPNRIVQKGTQYSLCIFRTSNGCGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQLYDNKGITYLFDLDYESDE----------FTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDVSSDSIDHSPAKKRARTVCKCGAVTCRGYL 409          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: CLR4_SCHPO (Histone-lysine N-methyltransferase, H3 lysine-9 specific OS=Schizosaccharomyces pombe GN=clr4 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.517e-27
Identity = 66/190 (34.74%), Postives = 94/190 (49.47%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY--------------HYELLSGEGYPCHCGASKCRGRLY 533
            N  CSC   CPNRV++ G  + LE+FKT+ KGW VR+ +    GTF+  Y+GEV+   E  KR   Y  DG  Y+ ++         + +    Y +DA  YG+VSRF NHSC PN+  +  +          +  +A +DI   EELT+DY                  +S     C CG++ CRG L+
Sbjct:  308 NSFCSCSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLD--------MFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLRRQCKCGSANCRGWLF 489          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SETMR_RAT (Histone-lysine N-methyltransferase SETMAR OS=Rattus norvegicus GN=Setmar PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.234e-26
Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLS-------------GEGYPCHCGASKC 518
            N +C C   C NRV+++G++  L+VF+TE KGW +R  + I +G FVCEY GEVL   E  +R          Y++ +  H  + G+++E      +D T  GN+ RF+NHSC PNL+   V ++SM      + L+A++DI  GEEL+YDY    L+                 PC+CGA  C
Sbjct:  120 NVLCQCGEHCRNRVVQSGLQFLLQVFQTEKKGWGLRTLEYIPKGRFVCEYAGEVLGFSEVQRRIHLQTAHDPNYIIALREHTYN-GQVME----TFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSM---VPKLALFAAKDILPGEELSYDYSGRFLNQISSKDKERIDCGQPRKPCYCGAQSC 295          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SETMR_HUMAN (Histone-lysine N-methyltransferase SETMAR OS=Homo sapiens GN=SETMAR PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.205e-26
Identity = 68/184 (36.96%), Postives = 99/184 (53.80%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY---HYELLSGEG----------YPCHCGASKC 518
            N +C C   C NRV++ G++   +VFKT  KGW +R  + I +G FVCEY GEVL   E  +R     +    Y++ I  H+ + G+++E      +D T  GN+ RF+NHSC PNL+   V ++SM      + L+A++DI   EEL+YDY   +  L   E            PC+CGA  C
Sbjct:  106 NVLCRCSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSDSNYIIAIREHVYN-GQVME----TFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSM---VPKLALFAAKDIVPEEELSYDYSGRYLNLTVSEDKERLDHGKLRKPCYCGAKSC 281          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SETMR_BOVIN (Histone-lysine N-methyltransferase SETMAR OS=Bos taurus GN=SETMAR PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.410e-26
Identity = 69/184 (37.50%), Postives = 99/184 (53.80%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY---HYELLSGEG----------YPCHCGASKC 518
            N +C C   C NRV++ G++  L+VFKT++KGW +R    I +G FVCEY GEVL   E  +R          Y++ I  H+ + G+++E      +D    GN+ RF+NHSC PNL+   V ++SM      + L+A+RDI   EEL+YDY      L+  E            PC+CGA  C
Sbjct:  106 NVLCQCSERCRNRVVQWGLQFHLQVFKTDHKGWGLRTLDFIPKGRFVCEYAGEVLGISEVQRRVQLQTIHDSNYIIAIREHVYN-GQVME----TFVDPASIGNIGRFLNHSCEPNLLMIPVRIDSM---VPKLALFAARDILPEEELSYDYSGRFLNLMHSEDKERLDNGKLRKPCYCGARSC 281          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUVR4_ARATH (Histone-lysine N-methyltransferase SUVR4 OS=Arabidopsis thaliana GN=SUVR4 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.096e-25
Identity = 65/179 (36.31%), Postives = 99/179 (55.31%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKT-ENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMG--RLIEGQVRYVIDATKYGNVSRFINHSC-FPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSG----EGYPCHCGASKCRGR 527
            C CD  C NRV++ G+R +L+V+ T E KGW +R  Q + +GTF+CEYIGE+L   E   R  R   +   Y + + A   D G  + ++ +    +DAT  GNV+RFINH C   N+++  + +E+ D    HI  +  RD+   +ELT+DY  +        + + C CG+  CR R
Sbjct:  285 CGCDMQCGNRVVQRGIRCQLQVYFTQEGKGWGLRTLQDLPKGTFICEYIGEILTNTELYDRNVRSSSERHTYPVTLDA---DWGSEKDLKDEEALCLDATICGNVARFINHRCEDANMIDIPIEIETPDRHYYHIAFFTLRDVKAMDELTWDYMIDFNDKSHPVKAFRCCCGSESCRDR 460          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUVH1_TOBAC (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Nicotiana tabacum GN=SUVH1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.096e-25
Identity = 64/173 (36.99%), Postives = 89/173 (51.45%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCRGRLY 533
            CSC   C NR+ + G + +LEVFKT+N+GW +R+   I  G F+CEY GEV+D    +     +        L      ND  R +   +  VI A   GN+SRF+NHSC PN+    V+ +S +    HI  +A R I   +ELT+DY  +        C CG+  CRG  Y
Sbjct:  534 CSCPPNCRNRMSQGGPKARLEVFKTKNRGWGLRSWDPIRGGGFICEYAGEVIDAGNYSDDNYIFDATRIYAPLEAERDYNDESRKVPFPL--VISAKNGGNISRFMNHSCSPNVYWQLVVRQSNNEATYHIAFFAIRHIPPMQELTFDYGMDKADHRRKKCLCGSLNCRGYFY 704          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUVH3_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.359e-24
Identity = 69/191 (36.13%), Postives = 96/191 (50.26%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLD--ELETNKRRSRYGRDGC----GYMLNIGAHINDMGRLIEGQVRY------VIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY---------HYELLSGEGYPCHCGASKCRG 524
            C C  +C NRV++ G++ +LEVFKT N+GW +R+  ++  G+F+CEY GEV D   L  N+    Y  D       +  N    + D     E    +      +I A K+GNV+RF+NHSC PN+    V+ E       HI  +A R I    ELTYDY            LL G+   C CG+ +CRG
Sbjct:  477 CPCHASCKNRVIQTGLKSRLEVFKTRNRGWGLRSWDSLRAGSFICEYAGEVKDNGNLRGNQEEDAYVFDTSRVFNSFKWNYEPELVDEDPSTEVPEEFNLPSPLLISAKKFGNVARFMNHSCSPNVFWQPVIREGNGESVIHIAFFAMRHIPPMAELTYDYGISPTSEARDESLLHGQ-RTCLCGSEQCRG 666          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUVR1_ARATH (Histone-lysine N-methyltransferase SUVR1 OS=Arabidopsis thaliana GN=SUVR1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.164e-24
Identity = 65/177 (36.72%), Postives = 93/177 (52.54%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKTEN-KGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCF-PNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEG----YPCHCGASKCRGR 527
            C C + C NRV++ G+  KL+VF T N KGW +R  + + +G F+CEYIGE+L   E  +R      D     + + AH     RL EG     +D   YGN+SRF+NH C   NL+   V VE+ D    H+  + +RDI   EEL +DY  +    +     + C CG+  CR +
Sbjct:  445 CGCTKRCGNRVVQRGMHNKLQVFFTPNGKGWGLRTLEKLPKGAFICEYIGEILTIPELYQRSF---EDKPTLPVILDAHWGSEERL-EGDKALCLDGMFYGNISRFLNHRCLDANLIEIPVQVETPDQHYYHLAFFTTRDIEAMEELAWDYGIDFNDNDSLMKPFDCLCGSRFCRNK 617          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUVH4_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.502e-23
Identity = 73/196 (37.24%), Postives = 100/196 (51.02%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEV-----LDELETNK-------RRSRYGRDGCGYML-NIGAHIND---MGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEG-------YPCHCGASKCRGRLY 533
            C C   C NR  +  +R  LEVF++  KGWAVR+ + I  G+ VCEYIG V     +D +  N+       +++  G  G    L ++   +N+        E    + IDA   GN +RFINHSC PNL    VL    D + A + L+A+ +I+  +ELTYDY Y L S  G         C+CGA  CR RLY
Sbjct:  429 CGCGPKCVNRTSQKRLRFNLEVFRSAKKGWAVRSWEYIPAGSPVCEYIGVVRRTADVDTISDNEYIFEIDCQQTMQGLGGRQRRLRDVAVPMNNGVSQSSEDENAPEFCIDAGSTGNFARFINHSCEPNLFVQCVLSSHQDIRLARVVLFAADNISPMQELTYDYGYALDSVHGPDGKVKQLACYCGALNCRKRLY 624          
The following BLAST results are available for this feature:
BLAST of CK938083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
SUV92_BOVIN4.990e-2734.74Histone-lysine N-methyltransferase SUV39H2 OS=Bos ... [more]
CLR4_SCHPO6.517e-2734.74Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SETMR_RAT3.234e-2636.96Histone-lysine N-methyltransferase SETMAR OS=Rattu... [more]
SETMR_HUMAN7.205e-2636.96Histone-lysine N-methyltransferase SETMAR OS=Homo ... [more]
SETMR_BOVIN9.410e-2637.50Histone-lysine N-methyltransferase SETMAR OS=Bos t... [more]
SUVR4_ARATH2.096e-2536.31Histone-lysine N-methyltransferase SUVR4 OS=Arabid... [more]
SUVH1_TOBAC2.096e-2536.99Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH3_ARATH1.359e-2436.13Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVR1_ARATH5.164e-2436.72Histone-lysine N-methyltransferase SUVR1 OS=Arabid... [more]
SUVH4_ARATH1.502e-2337.24Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004478_C08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938083 ID=CK938083; Name=CK938083; organism=Citrus sinensis; type=EST; length=827bp
GGGGCAATCACATGTGTAGCTGCGATAGAACCTGTCCAAATAGAGTTTTG
CGGAATGGAGTACGAGTGAAATTAGAAGTCTTTAAAACAGAGAATAAGGG
TTGGGCCGTTAGGGCAGGTCAAGCAATTCTGCGAGGCACATTTGTATGTG
AGTATATAGGGGAGGTTTTAGATGAGCTGGAGACAAATAAGAGGCGTAGC
AGGTATGGTAGAGACGGATGCGGTTATATGTTAAATATTGGTGCCCATAT
CAATGATATGGGCAGATTGATTGAAGGACAGGTCCGGTATGTCATTGACG
CCACTAAGTATGGAAATGTTTCTCGATTCATCAATCATAGCTGCTTTCCG
AATCTTGTGAATCACCAAGTTCTCGTGGAAAGTATGGATTATCAGCGTGC
CCATATTGGTCTCTATGCAAGTCGAGATATAGCTGTGGGTGAAGAACTGA
CGTATGACTATCACTACGAGCTTCTGTCTGGAGAAGGATATCCATGCCAT
TGTGGAGCTTCAAAGTGCAGGGGACGCCTTTACTGAATCTTTAAAGGACA
TGATTGTAGTCTCCCCAGCATGCAGAAGTTTTGTTTTGAACTTTGGCAAA
TAAAAGCTGGTCAAATTGGCCGGTTATCAACTTATTGCCATAGTAGCTGC
TTACAATATGATTGCCAAGCAAGTCTTCTTGCACAGAGGAAAATTCACCA
GCAGTGGCAATGGGTTTTCTGTGCCACCTGATCACGTGGTTTCTTTCCTC
AAGTAGATATGATACCCAAATGCTCTTTTGTGTACTCAGCACTTGGAAGA
AAAGAGGATGCAAACTCGTTATTTATT
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