CK938083

Overview
NameCK938083
Unique NameCK938083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SET2_NEUCR (Histone-lysine N-methyltransferase, H3 lysine-36 specific OS=Neurospora crassa GN=set-2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.464e-20
Identity = 53/170 (31.18%), Postives = 84/170 (49.41%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCRG 524
            C+C   C N+  +      + V KTE KG+ +RA   +    F+ EYIGEV++E     R  +Y ++G  +   +    ++            +DATK GN+ RF NHSC PN    + +V      +  +G++A R I  GEEL ++Y+ +    +  PC+CG   C G
Sbjct:  165 CNCGSGCQNQRFQRKQYADVSVIKTEKKGFGLRANTDLQVNDFIFEYIGEVINEPTFRSRMVKYDKEGIKHFYFMSLTKSEF-----------VDATKKGNLGRFCNHSCDPNCYVDKWVVG----DKLRMGIFAGRAIKAGEELVFNYNVDRYGADPQPCYCGEPNCTG 319          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SET2_DEBHA (Histone-lysine N-methyltransferase, H3 lysine-36 specific OS=Debaryomyces hansenii GN=SET2 PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.908e-20
Identity = 56/176 (31.82%), Postives = 87/176 (49.43%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYV-----IDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKC 518
            N  C+C   C N+  +      + V +TE KG+ +RA + I   +F+ EYIGEV+DE    KR   Y                D  +LI      +     IDAT  G+++RF NHSC PN    + +V     ++  +G+++ R+I  GEE+T+DY+ +    +  PC+CG   C
Sbjct:   90 NKFCTCGNDCQNQRFQKKQYANVTVIQTELKGYGLRANEDISESSFIYEYIGEVIDEESFRKRMIDY----------------DTKKLIHFYFMMLKKDSFIDATMKGSLARFCNHSCNPNAYVDKWVVG----EKLRMGIFSKRNIQKGEEITFDYNVDRYGAQSQPCYCGEPNC 245          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUVH7_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 OS=Arabidopsis thaliana GN=SUVH7 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.716e-20
Identity = 66/190 (34.74%), Postives = 95/190 (50.00%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIG-----EVLDE-----LETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY---------HYELLSGEG-YPCHCGASKCRG 524
            C C   CP R+++ G+++ LEVFKT N GW +R+   I  GTF+CE+ G     E ++E      +T+K   R+ R      L +      +   I    + +I A + GNV RF+NHSC PN+    +  E+       IGL+A + I    ELTYDY           E+L  +G   C CG+ KCRG
Sbjct:  502 CPCPDHCPTRLVQTGLKLHLEVFKTRNCGWGLRSWDPIRAGTFICEFAGLRKTKEEVEEDDDYLFDTSKIYQRF-RWNYEPELLLEDSWEQVSEFINLPTQVLISAKEKGNVGRFMNHSCSPNVFWQPIEYENRGDVYLLIGLFAMKHIPPMTELTYDYGVSCVERSEEDEVLLYKGKKTCLCGSVKCRG 690          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SET2_YARLI (Histone-lysine N-methyltransferase, H3 lysine-36 specific OS=Yarrowia lipolytica GN=set-2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.316e-19
Identity = 59/170 (34.71%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   21 CDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCRGRL 530
            C + C N+  +      ++V  TE KG+ +RA + I  G FV EY+GEV+DE    +R + Y   G  +   +         L +G+    IDAT  G + RF NHSC PN    + +V     +R  +G++ASR I  GEE+T+DY+ +    E   C+CG   C G L
Sbjct:   77 CCKGCQNKRFQGKKYASVDVISTEKKGFGLRATKDIAAGEFVYEYVGEVIDEPTFKERTAIYTTQGVKHFYFM--------MLQKGE---FIDATAKGGLGRFCNHSCAPNGHVEKWVVG----KRLRMGIFASRHIQRGEEVTFDYNVDRYGAEAQACYCGEKNCVGFL 231          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: NSD2_MOUSE (Probable histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.719e-19
Identity = 61/175 (34.86%), Postives = 86/175 (49.14%), Query Frame = 3
Query:   12 MCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGR--LIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCRGRL 530
            +C     C N+        + ++ KT+ KGW + A + I +G FV EY+GE++DE E    R +Y            AH ND+    ++      +IDA   GN SRF+NHSC PN    +  V         +GL+A  DI  G ELT++Y+ + L  E   C CGAS C G L
Sbjct: 1045 VCPAGEYCQNQCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDE-EECMARIKY------------AHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCETLKWTVNG----DTRVGLFAVCDIPAGTELTFNYNLDCLGNEKTVCRCGASNCSGFL 1202          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: NSD2_HUMAN (Probable histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.719e-19
Identity = 60/175 (34.29%), Postives = 84/175 (48.00%), Query Frame = 3
Query:   12 MCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGR--LIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCRGRL 530
            +C     C N+        + ++ KT+ KGW + A + I +G FV EY+GE++DE E   R                AH ND+    ++      +IDA   GN SRF+NHSC PN    +  V         +GL+A  DI  G ELT++Y+ + L  E   C CGAS C G L
Sbjct: 1045 VCPAGEFCQNQCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKH-------------AHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCETLKWTVNG----DTRVGLFAVCDIPAGTELTFNYNLDCLGNEKTVCRCGASNCSGFL 1202          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: ASHH3_ARATH (Histone-lysine N-methyltransferase ASHH3 OS=Arabidopsis thaliana GN=ASHH3 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.719e-19
Identity = 60/174 (34.48%), Postives = 89/174 (51.15%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKR--RSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCRGRL 530
            C C   C N+  +     K+++ +TE  G  + A + I  G F+ EY+GEV+D+    +R  + ++  +   Y+  I     DM          VIDAT  GN SR+INHSC PN    + +++        IG++A+R I  GE LTYDY + +  G    CHCGA  CR +L
Sbjct:   99 CKCGSECNNKPFQQRHVKKMKLIQTEKCGSGIVAEEEIEAGEFIIEYVGEVIDDKTCEERLWKMKHRGETNFYLCEI---TRDM----------VIDATHKGNKSRYINHSCNPNTQMQKWIIDG----ETRIGIFATRGIKKGEHLTYDYQF-VQFGADQDCHCGAVGCRRKL 254          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: HKNMT_PLAF7 (Putative histone-lysine N-methyltransferase PFF1440w OS=Plasmodium falciparum (isolate 3D7) GN=PFF1440w PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.932e-19
Identity = 60/157 (38.22%), Postives = 85/157 (54.14%), Query Frame = 3
Query:   66 VKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGR-DGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLS-GEGYPCHCGASKCRGRL 530
            ++L V K+   G+ +   + I  G  V EYIGE +  + ++KR   Y + +   YM  +  +I             +IDATK+GNVSRFINHSC PN       + S D    HI ++A RDIA  EE+TYDY + + S G+   C CG+S C GR+
Sbjct: 6612 LRLYVKKSSIHGYGLYTCEFINEGEPVIEYIGEYIRNIISDKREKYYDKIESSCYMFRLNENI-------------IIDATKWGNVSRFINHSCEPNCF---CKIVSCDQNLKHIVIFAKRDIAAHEEITYDYQFGVESEGKKLICLCGSSTCLGRM 6752          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: ASHH2_ARATH (Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis thaliana GN=ASHH2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.932e-19
Identity = 55/171 (32.16%), Postives = 85/171 (49.71%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHY-ELLSGEGYPCHCGASKCRG 524
            C     C N+  +    VK E F++  KG+ +R  + +  G F+ EY+GEVLD      R+  Y   G  +   +  + N+           VIDA   GN+ RFINHSC PN    + +V         +G+++ +D+  G+ELT+DY+Y  +       C+CG+S CRG
Sbjct: 1009 CPAGDLCSNQQFQKRKYVKFERFQSGKKGYGLRLLEDVREGQFLIEYVGEVLDMQSYETRQKEYAFKGQKHFYFMTLNGNE-----------VIDAGAKGNLGRFINHSCEPNCRTEKWMVNG----EICVGIFSMQDLKKGQELTFDYNYVRVFGAAAKKCYCGSSHCRG 1164          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: ASHH1_ARATH (Histone-lysine N-methyltransferase ASHH1 OS=Arabidopsis thaliana GN=ASHH1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.932e-19
Identity = 58/174 (33.33%), Postives = 81/174 (46.55%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGC--GYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCRGRL 530
            C C   C N+  +     K ++ K E +GW + A + I  G F+ EY GEV+   E  KR   Y   G    Y++++ A                IDATK G+++RFINHSC PN    +  V         +G++A   I+   EL YDY++E   G    C CGA  C G L
Sbjct:   72 CPCGVYCKNQKFQKCEYAKTKLIKCEGRGWGLVALEEIKAGQFIMEYCGEVISWKEAKKRAQTYETHGVKDAYIISLNA-------------SEAIDATKKGSLARFINHSCRPNCETRKWNV----LGEVRVGIFAKESISPRTELAYDYNFEWYGGAKVRCLCGAVACSGFL 228          
The following BLAST results are available for this feature:
BLAST of CK938083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
SET2_NEUCR3.464e-2031.18Histone-lysine N-methyltransferase, H3 lysine-36 s... [more]
SET2_DEBHA5.908e-2031.82Histone-lysine N-methyltransferase, H3 lysine-36 s... [more]
SUVH7_ARATH7.716e-2034.74Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SET2_YARLI1.316e-1934.71Histone-lysine N-methyltransferase, H3 lysine-36 s... [more]
NSD2_MOUSE1.719e-1934.86Probable histone-lysine N-methyltransferase NSD2 O... [more]
NSD2_HUMAN1.719e-1934.29Probable histone-lysine N-methyltransferase NSD2 O... [more]
ASHH3_ARATH1.719e-1934.48Histone-lysine N-methyltransferase ASHH3 OS=Arabid... [more]
HKNMT_PLAF72.932e-1938.22Putative histone-lysine N-methyltransferase PFF144... [more]
ASHH2_ARATH2.932e-1932.16Histone-lysine N-methyltransferase ASHH2 OS=Arabid... [more]
ASHH1_ARATH2.932e-1933.33Histone-lysine N-methyltransferase ASHH1 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004478_C08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938083 ID=CK938083; Name=CK938083; organism=Citrus sinensis; type=EST; length=827bp
GGGGCAATCACATGTGTAGCTGCGATAGAACCTGTCCAAATAGAGTTTTG
CGGAATGGAGTACGAGTGAAATTAGAAGTCTTTAAAACAGAGAATAAGGG
TTGGGCCGTTAGGGCAGGTCAAGCAATTCTGCGAGGCACATTTGTATGTG
AGTATATAGGGGAGGTTTTAGATGAGCTGGAGACAAATAAGAGGCGTAGC
AGGTATGGTAGAGACGGATGCGGTTATATGTTAAATATTGGTGCCCATAT
CAATGATATGGGCAGATTGATTGAAGGACAGGTCCGGTATGTCATTGACG
CCACTAAGTATGGAAATGTTTCTCGATTCATCAATCATAGCTGCTTTCCG
AATCTTGTGAATCACCAAGTTCTCGTGGAAAGTATGGATTATCAGCGTGC
CCATATTGGTCTCTATGCAAGTCGAGATATAGCTGTGGGTGAAGAACTGA
CGTATGACTATCACTACGAGCTTCTGTCTGGAGAAGGATATCCATGCCAT
TGTGGAGCTTCAAAGTGCAGGGGACGCCTTTACTGAATCTTTAAAGGACA
TGATTGTAGTCTCCCCAGCATGCAGAAGTTTTGTTTTGAACTTTGGCAAA
TAAAAGCTGGTCAAATTGGCCGGTTATCAACTTATTGCCATAGTAGCTGC
TTACAATATGATTGCCAAGCAAGTCTTCTTGCACAGAGGAAAATTCACCA
GCAGTGGCAATGGGTTTTCTGTGCCACCTGATCACGTGGTTTCTTTCCTC
AAGTAGATATGATACCCAAATGCTCTTTTGTGTACTCAGCACTTGGAAGA
AAAGAGGATGCAAACTCGTTATTTATT
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