CK938083

Overview
NameCK938083
Unique NameCK938083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: MLL1_MOUSE (Histone-lysine N-methyltransferase MLL OS=Mus musculus GN=Mll PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.609e-17
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 3
Query:   42 RVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCG-YMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEG-YPCHCGASKCR 521
            R L+   +  + V+++   G  +   + I  G  V EY G V+  ++T+KR   Y   G G YM  I                 V+DAT +GN +RFINHSC PN  +  + ++     + HI ++A R I  GEELTYDY + +       PC+CGA KCR
Sbjct: 3818 RHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDS-------------EVVDATMHGNAARFINHSCEPNCYSRVINIDG----QKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCR 3962          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: MLL1_HUMAN (Histone-lysine N-methyltransferase MLL OS=Homo sapiens GN=MLL PE=1 SV=5)

HSP 1 Score: 90.1225 bits (222), Expect = 1.609e-17
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 3
Query:   42 RVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCG-YMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEG-YPCHCGASKCR 521
            R L+   +  + V+++   G  +   + I  G  V EY G V+  ++T+KR   Y   G G YM  I                 V+DAT +GN +RFINHSC PN  +  + ++     + HI ++A R I  GEELTYDY + +       PC+CGA KCR
Sbjct: 3821 RHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDS-------------EVVDATMHGNAARFINHSCEPNCYSRVINIDG----QKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCR 3965          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: MES4_DROME (Probable histone-lysine N-methyltransferase Mes-4 OS=Drosophila melanogaster GN=Mes-4 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.584e-17
Identity = 53/175 (30.29%), Postives = 86/175 (49.14%), Query Frame = 3
Query:   15 CSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKR--RSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHY-ELLSGEGYPCHCGASKCRGRL 530
            C     C NR+       +LEV     +G+ +   + I  G FV EY+GEV++  E  +R  + +  RD   Y L +             +  ++IDA   GN++RF+NHSC PN    +  V  +      +G++A +DI V  ELT++Y + +L++     C CGA +C G +
Sbjct: 1217 CKAGSLCENRMFEQRKSPRLEVVYMNERGFGLVNREPIAVGDFVIEYVGEVINHAEFQRRMEQKQRDRDENYYFLGV-------------EKDFIIDAGPKGNLARFMNHSCEPNCETQKWTVNCIH----RVGIFAIKDIPVNSELTFNYLWDDLMNNSKKACFCGAKRCSGEI 1374          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SET1_CHAGB (Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Chaetomium globosum GN=SET1 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.681e-17
Identity = 56/147 (38.10%), Postives = 75/147 (51.02%), Query Frame = 3
Query:  102 WAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCG--YMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHY--ELLSGEGYPCHCGASKCRGRL 530
            W + A + I +   + EY+GE + +     R +RY + G G  Y+  I  +              VIDATK G ++RFINHSC PN     + VE        I +YA RDIA  EELTYDY +  EL S +  PC CG + C+G L
Sbjct:  946 WGLYAMENIPKDDMIIEYVGEEVRQQIAELRENRYLKSGIGSSYLFRIDDNT-------------VIDATKKGGIARFINHSCMPNCTAKIIKVEG----SKRIVIYALRDIAQNEELTYDYKFERELGSTDRIPCLCGTAACKGFL 1075          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUVH8_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8 OS=Arabidopsis thaliana GN=SUVH8 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.985e-17
Identity = 57/190 (30.00%), Postives = 92/190 (48.42%), Query Frame = 3
Query:   21 CDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIG--EVLDELETNK----------RRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMD-YQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYP---------CHCGASKCRG 524
            C  +CP R++  G+++ LEVFKT N GW +R+   I  GTF+CE+ G  +  +E+E +              R+  +      +    +++   L     + +I A + GNV RF+NH+C+PN+    +  +  + +    IGL+A + I    ELTYDY    +   G           C CG+ KCRG
Sbjct:  566 CGGSCPTRMVETGLKLHLEVFKTSNCGWGLRSWDPIRAGTFICEFTGVSKTKEEVEEDDDYLFDTSRIYHSFRWNYEPELLCEDACEQVSEDANL---PTQVLISAKEKGNVGRFMNHNCWPNVFWQPIEYDDNNGHIYVRIGLFAMKHIPPMTELTYDYGISCVEKTGEDEVIYKGKKICLCGSVKCRG 752          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SET1_NEUCR (Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Neurospora crassa GN=set-1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.985e-17
Identity = 55/147 (37.41%), Postives = 75/147 (51.02%), Query Frame = 3
Query:  102 WAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCG--YMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHY--ELLSGEGYPCHCGASKCRGRL 530
            W + A + I +   + EY+GE + +     R +RY + G G  Y+  I  +              VIDATK G ++RFINHSC PN     + VE        I +YA RDIA  EELTYDY +  E+ S +  PC CG + C+G L
Sbjct: 1183 WGLYAMENINKDDMIIEYVGEEVRQQIAELREARYLKSGIGSSYLFRIDDNT-------------VIDATKKGGIARFINHSCMPNCTAKIIKVEG----SKRIVIYALRDIAQNEELTYDYKFEREIGSTDRIPCLCGTAACKGFL 1312          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SET1B_XENTR (Histone-lysine N-methyltransferase SETD1B OS=Xenopus tropicalis GN=setd1b PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.985e-17
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   69 KLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCG--YMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCRGRL 530
            KL   K+    W + A + I+    V EY+G+ + ++  + R  RY  +G G  YM  +                 +IDATK GN +RFINHSC PN     + VES    +  I +Y+ + I V EE+TYDY +  +     PC CGA  CRG L
Sbjct: 1818 KLRFCKSHIHDWGLFAMEPIIADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDT-------------IIDATKCGNFARFINHSCNPNCYAKVITVES----QKKIVIYSKQYINVNEEITYDYKFP-IEDVKIPCLCGAENCRGTL 1955          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SE1BA_DANRE (Histone-lysine N-methyltransferase SETD1B-A OS=Danio rerio GN=setd1ba PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.985e-17
Identity = 54/156 (34.62%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   69 KLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCG--YMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCRGRL 530
            K+   ++    W + A + I     V EY+G+ + ++  + R  RY  +G G  YM  +                 +IDATK GN +RFINHSC PN     + VES    +  I +Y+ + I V EE+TYDY +  +  E  PC CGA  CRG L
Sbjct: 1706 KIRFCRSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDT-------------IIDATKCGNFARFINHSCNPNCYAKVITVES----QKKIVIYSRQPINVNEEITYDYKFP-IEDEKIPCLCGAENCRGTL 1843          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: TRX_DROVI (Histone-lysine N-methyltransferase trithorax OS=Drosophila virilis GN=trx PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.362e-16
Identity = 57/161 (35.40%), Postives = 82/161 (50.93%), Query Frame = 3
Query:   42 RVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCG-YMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCR 521
            R L+   +  + VF++   G  +   + I  G  V EY GE++    T+KR   Y   G G YM  I  ++             V+DAT  GN +RFINHSC PN   +  +V+ + ++  HI ++A R I  GEELTYDY +     E  PC CG+ +CR
Sbjct: 3682 RTLKETYKDYVGVFRSHIHGRGLYCTKDIEAGEMVIEYAGELIRSTLTDKRERYYDSRGIGCYMFKIDDNL-------------VVDATMRGNAARFINHSCEPNC--YSKVVDILGHK--HIIIFALRRIVQGEELTYDYKFP-FEDEKIPCSCGSKRCR 3824          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SET2_CAEEL (Probable histone-lysine N-methyltransferase set-2 OS=Caenorhabditis elegans GN=set-2 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.362e-16
Identity = 53/146 (36.30%), Postives = 71/146 (48.63%), Query Frame = 3
Query:   99 GWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCG--YMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEGYPCHCGASKCRGRL 530
            GW + A ++I     + EYIG+ +  L   +R   Y R G G  Y+  I  H             +VIDATK GN +RFINHSC PN     + +E        I +Y+   I  GEE+TYDY +  +  +   C CGA  CRG L
Sbjct: 1379 GWGLYAMESIAPDEMIVEYIGQTIRSLVAEEREKAYERRGIGSSYLFRIDLH-------------HVIDATKRGNFARFINHSCQPNCYAKVLTIEG----EKRIVIYSRTIIKKGEEITYDYKFP-IEDDKIDCLCGAKTCRGYL 1506          
The following BLAST results are available for this feature:
BLAST of CK938083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
MLL1_MOUSE1.609e-1734.57Histone-lysine N-methyltransferase MLL OS=Mus musc... [more]
MLL1_HUMAN1.609e-1734.57Histone-lysine N-methyltransferase MLL OS=Homo sap... [more]
MES4_DROME3.584e-1730.29Probable histone-lysine N-methyltransferase Mes-4 ... [more]
SET1_CHAGB4.681e-1738.10Histone-lysine N-methyltransferase, H3 lysine-4 sp... [more]
SUVH8_ARATH7.985e-1730.00Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SET1_NEUCR7.985e-1737.41Histone-lysine N-methyltransferase, H3 lysine-4 sp... [more]
SET1B_XENTR7.985e-1735.26Histone-lysine N-methyltransferase SETD1B OS=Xenop... [more]
SE1BA_DANRE7.985e-1734.62Histone-lysine N-methyltransferase SETD1B-A OS=Dan... [more]
TRX_DROVI1.362e-1635.40Histone-lysine N-methyltransferase trithorax OS=Dr... [more]
SET2_CAEEL1.362e-1636.30Probable histone-lysine N-methyltransferase set-2 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004478_C08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938083 ID=CK938083; Name=CK938083; organism=Citrus sinensis; type=EST; length=827bp
GGGGCAATCACATGTGTAGCTGCGATAGAACCTGTCCAAATAGAGTTTTG
CGGAATGGAGTACGAGTGAAATTAGAAGTCTTTAAAACAGAGAATAAGGG
TTGGGCCGTTAGGGCAGGTCAAGCAATTCTGCGAGGCACATTTGTATGTG
AGTATATAGGGGAGGTTTTAGATGAGCTGGAGACAAATAAGAGGCGTAGC
AGGTATGGTAGAGACGGATGCGGTTATATGTTAAATATTGGTGCCCATAT
CAATGATATGGGCAGATTGATTGAAGGACAGGTCCGGTATGTCATTGACG
CCACTAAGTATGGAAATGTTTCTCGATTCATCAATCATAGCTGCTTTCCG
AATCTTGTGAATCACCAAGTTCTCGTGGAAAGTATGGATTATCAGCGTGC
CCATATTGGTCTCTATGCAAGTCGAGATATAGCTGTGGGTGAAGAACTGA
CGTATGACTATCACTACGAGCTTCTGTCTGGAGAAGGATATCCATGCCAT
TGTGGAGCTTCAAAGTGCAGGGGACGCCTTTACTGAATCTTTAAAGGACA
TGATTGTAGTCTCCCCAGCATGCAGAAGTTTTGTTTTGAACTTTGGCAAA
TAAAAGCTGGTCAAATTGGCCGGTTATCAACTTATTGCCATAGTAGCTGC
TTACAATATGATTGCCAAGCAAGTCTTCTTGCACAGAGGAAAATTCACCA
GCAGTGGCAATGGGTTTTCTGTGCCACCTGATCACGTGGTTTCTTTCCTC
AAGTAGATATGATACCCAAATGCTCTTTTGTGTACTCAGCACTTGGAAGA
AAAGAGGATGCAAACTCGTTATTTATT
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