CK937979
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_PONAB (60S ribosomal protein L40 OS=Pongo abelii GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_PIG (60S ribosomal protein L40 OS=Sus scrofa GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_OPHHA (60S ribosomal protein L40 OS=Ophiophagus hannah PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_MOUSE (60S ribosomal protein L40 OS=Mus musculus GN=Uba52 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_MACFA (60S ribosomal protein L40 OS=Macaca fascicularis GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_HUMAN (60S ribosomal protein L40 OS=Homo sapiens GN=UBA52 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_FELCA (60S ribosomal protein L40 OS=Felis catus GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_CHICK (60S ribosomal protein L40 OS=Gallus gallus GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_CANFA (60S ribosomal protein L40 OS=Canis familiaris GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_BOVIN (60S ribosomal protein L40 OS=Bos taurus GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52 The following BLAST results are available for this feature:
BLAST of CK937979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937979 ID=CK937979; Name=CK937979; organism=Citrus sinensis; type=EST; length=577bpback to top |