CK937934

Overview
NameCK937934
Unique NameCK937934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_METS4 (Anthranilate phosphoribosyltransferase OS=Methylobacterium sp. (strain 4-46) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.225e-23
Identity = 62/130 (47.69%), Postives = 79/130 (60.77%), Query Frame = 3
Query:  255 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            LT  EA+ + D+LL+ E   A   AFL+ LR +GE   EIVG A A+ +   +V     A+DIVGTGGD + + N+ST ASIL AACG  VAK             DVL ALGV + LDPEG+ RC++EA
Sbjct:   17 LTREEARTAFDHLLSGEVTHAQAGAFLMALRVRGEAQDEIVGAAGALRERMVRVVAPAGAIDIVGTGGDHSGSYNVSTLASILTAACGVPVAKHGNRAASSRSGAADVLAALGVRLGLDPEGLARCLEEA 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_SYMTH (Anthranilate phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.811e-22
Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 3
Query:  252 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            DLTEA+A+A++  ++  EA  A ++AFL+ LR KGET  EI G AR M + A ++       VD  GTGGDG++T NIST A+ + A  G  VAK             DVLEALG+ +DL PE V RC+DE
Sbjct:   13 DLTEAQAEAAMTLMMTGEATPAQVAAFLMALRIKGETVAEITGAARVMRERAIRIHHSRPLVVDTCGTGGDGSHTFNISTTAAFVVAGAGVAVAKHGNRAATSLTGSADVLEALGIHLDLTPEEVGRCIDE 143          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_STRAW (Anthranilate phosphoribosyltransferase OS=Streptomyces avermitilis GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.811e-22
Identity = 63/141 (44.68%), Postives = 84/141 (59.57%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            E+++ L+   D +  +   ++D ++  EA +A I+ FLV LRAKGET  EI GL RAM ++A  +E  G  VDIVGTGGDGA TVNIST +SI+ A  G KV K             DVLE LG+ + L P+ V    +EA
Sbjct:   19 EVLNGLLDGRDQSADDTAWAMDRIMRGEATDAQIAGFLVALRAKGETVEEISGLVRAMYEHANLIEVPGATVDIVGTGGDGAKTVNISTMSSIVVAGTGAKVVKHGNRAASSASGSSDVLEKLGINLQLTPKRVAEVAEEA 159          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_RHOSR (Anthranilate phosphoribosyltransferase OS=Rhodococcus sp. (strain RHA1) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.811e-22
Identity = 68/152 (44.74%), Postives = 92/152 (60.53%), Query Frame = 3
Query:  186 SDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            +D  RP    +  ++  L    DL+  EA+ ++D ++++ A  A I+AF V L+ KGET  E+ GLA +M+ +A KV    D VDIVGTGGD +NTVNIST AS++ AA G +V K             DVLEALGV I+L P+ V RCV E
Sbjct:   10 NDGVRPART-WPSVLGTLTDGRDLSVDEAKWAMDEIMSDNATSAQIAAFGVALKMKGETPEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVRE 160          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSF (Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.365e-22
Identity = 61/151 (40.40%), Postives = 84/151 (55.63%), Query Frame = 3
Query:  237 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            ++ R DL+++E    +D +++ EA  A I+AF+  LR KGET  EI G AR M   AT++                 L   +D+VGTGGDG NT NIST  S + AACG KVAK             DV+EALG+ +++ PE V  C++EA
Sbjct:    9 VVEREDLSQSEMIQVMDQIMSGEATPAQIAAFITALRMKGETVAEIAGAARVMRDRATRIRVGKNVLDLDRDDINIDLETILDVVGTGGDGTNTFNISTTVSFVVAACGVKVAKHGNRSVSSACGSADVVEALGISLEVTPETVENCINEA 159          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_DESAA (Anthranilate phosphoribosyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.270e-22
Identity = 59/143 (41.26%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  216 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            F+EL+  ++S  DL E E    +D +++ E +   I+AF+  L  KGETF E+ G AR+M + AT+++      VD  GTGGDGA+T NIST ++ + A CG  VAK             DVLEALGV +D  PE V + ++E
Sbjct:    2 FSELLKKIVSGQDLAEDETTTMMDAIMSGEVEVPAIAAFMAALATKGETFTELAGAARSMRRKATRIQVSSNTVVDTCGTGGDGASTFNISTTSAFVVAGCGVTVAKHGNRSVSSKCGSADVLEALGVKLDTHPEVVEQGIEE 144          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_BEII9 (Anthranilate phosphoribosyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.883e-22
Identity = 60/140 (42.86%), Postives = 76/140 (54.29%), Query Frame = 3
Query:  216 FNELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCV 632
            F   I  L +   LT AEA+A+ D +   E   A +  FL+ +R +GET  EI+G   AM     +V+   DA+DIVGTGGDG  T N+ST AS++ AACG  VAK             DVL ALGV   LD  GV  C+
Sbjct:    4 FKPFIAKLATGSSLTRAEAEAAFDQIFAGEVTPAQLGGFLMAMRVRGETVDEIIGAVTAMRARMVRVDAPTDAIDIVGTGGDGHGTFNVSTLASLIVAACGVPVAKHGNRAASSRSGASDVLSALGVRTGLDSAGVEACI 143          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_RHOOB (Anthranilate phosphoribosyltransferase OS=Rhodococcus opacus (strain B4) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.989e-22
Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = 3
Query:  252 DLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            DL   +A+ ++D ++++ A  A I+AF V L+ KGET  E+ GLA +M+ +A KV    D VDIVGTGGD +NTVNIST AS++ AA G +V K             DVLEALGV I+L P+ V RCV E
Sbjct:   31 DLAVDDAKWAMDEIMSDNATSAQIAAFGVALKMKGETPEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVRE 160          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_THEFY (Anthranilate phosphoribosyltransferase OS=Thermobifida fusca (strain YX) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.174e-21
Identity = 56/133 (42.11%), Postives = 84/133 (63.16%), Query Frame = 3
Query:  216 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDP 611
            ++ LI  L++   LT  + + +++ +++  A +A I+ F + LRAKGE+  E+ GLA+ M+ +A  +   G  +DIVGTGGD A+TVN+ST ASI+A+A G +V K             DVLE LGV+IDLDP
Sbjct:    6 WSHLISALLNGTSLTADDTKWAMNEIMSGSATDAQIAGFAIALRAKGESVAEVRGLAQGMLDHAVTISVPGATLDIVGTGGDRAHTVNVSTMASIVASAAGARVVKHGNRAASSSCGTADVLERLGVIIDLDP 138          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_SALAI (Anthranilate phosphoribosyltransferase OS=Salinispora arenicola (strain CNS-205) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.533e-21
Identity = 64/145 (44.14%), Postives = 86/145 (59.31%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD----AVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            +L+  L+   +L+ A+ A A  + +   A  A I+ F + LRAKGET  E+ GL  AM+++A +VE   D    AVD+VGTGGD A+TVNIST AS++ A  G +V K             DVLE LG+ +DL PEGV  CV EA
Sbjct:    8 QLLAALLRGDELSTADTAWAMGEIMSGSAGSAQIAGFAIALRAKGETPAEVSGLVEAMLQHAVRVELPEDLRATAVDVVGTGGDLAHTVNISTMASLVVAGAGVRVVKHGNRAASSSCGTADVLEFLGLPLDLGPEGVAACVAEA 152          
The following BLAST results are available for this feature:
BLAST of CK937934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_METS46.225e-2347.69Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_SYMTH1.811e-2246.56Anthranilate phosphoribosyltransferase OS=Symbioba... [more]
TRPD_STRAW1.811e-2244.68Anthranilate phosphoribosyltransferase OS=Streptom... [more]
TRPD_RHOSR1.811e-2244.74Anthranilate phosphoribosyltransferase OS=Rhodococ... [more]
TRPD_GEOSF2.365e-2240.40Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_DESAA5.270e-2241.26Anthranilate phosphoribosyltransferase OS=Desulfat... [more]
TRPD_BEII96.883e-2242.86Anthranilate phosphoribosyltransferase OS=Beijerin... [more]
TRPD_RHOOB8.989e-2248.46Anthranilate phosphoribosyltransferase OS=Rhodococ... [more]
TRPD_THEFY1.174e-2142.11Anthranilate phosphoribosyltransferase OS=Thermobi... [more]
TRPD_SALAI1.533e-2144.14Anthranilate phosphoribosyltransferase OS=Salinisp... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004480_B03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937934 ID=CK937934; Name=CK937934; organism=Citrus sinensis; type=EST; length=641bp
GGGGAACAACAATGACTTTGNNNNNNTTGTTGAATTTAACTGCAGTTTCT
TCCTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTC
GCTTCGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAG
AATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGT
CCTCTAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGT
GGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATG
AAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAA
GGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTA
TGCTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAG
GAGGTGACGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTT
GCTGCAGCTTGTGGTACAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTC
TTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTG
ACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCA
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