CK937934

Overview
NameCK937934
Unique NameCK937934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_COREF (Anthranilate phosphoribosyltransferase OS=Corynebacterium efficiens GN=trpD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.302e-19
Identity = 52/113 (46.02%), Postives = 68/113 (60.18%), Query Frame = 3
Query:  294 LNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATK--VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRR 626
            + E D+  I+A L  +R +GETF +I G A+A +       V G G  +D  GTGGDGANT+NI+TGAS++AAA G KV K             DVLEAL + +DLDPE  +R
Sbjct:   33 IGEYDDVHIAALLATIRTRGETFADIAGAAKAFLNAGRPFPVPGTG-VLDTAGTGGDGANTINITTGASLVAAAGGLKVVKHGNRSVSSKSGSADVLEALNIPLDLDPERAQR 144          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_VIBPA (Anthranilate phosphoribosyltransferase OS=Vibrio parahaemolyticus GN=trpD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18
Identity = 55/140 (39.29%), Postives = 80/140 (57.14%), Query Frame = 3
Query:  225 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            +I+ L  +  LT+ E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R+ VD+
Sbjct:    4 IINKLYEQQSLTQEESQQLFDIIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRKAVDD 143          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PSYIN (Anthranilate phosphoribosyltransferase OS=Psychromonas ingrahamii (strain 37) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18
Identity = 52/142 (36.62%), Postives = 81/142 (57.04%), Query Frame = 3
Query:  219 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            +E+++ L +   LT  ++QA  + ++  + D  ++S+ L  L+ KGET  EI G A A++  AT       D  DIVGTGGDG  T+NIST ++ +AAACG KV K             D+L A G+ +D+  +  R+C+D+
Sbjct:    7 HEILEQLYAAKSLTSEQSQAFFERVVQGQVDPIILSSVLTALKIKGETAQEITGAANALLAQATPFPRPDYDFTDIVGTGGDGLGTINISTASAFVAAACGLKVCKHGSRSVSSKSGSSDLLAAFGLNLDMSAQQARQCLDD 148          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_BRAJA (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=trpD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18
Identity = 57/139 (41.01%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  225 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            +I  + +   L+  EA ++ D +++ EA  + +   L+ LR +GET  EI G   AM      V    DAVDIVGTGGDG+ +VN+ST AS + +  G  VAK             DVL +LGV IDL PE V RCV E
Sbjct:    7 IIGKVATGASLSRDEAASAFDAMMSGEATPSQMGGLLMALRVRGETVDEITGAVAAMRSKMLTVTAPPDAVDIVGTGGDGSGSVNVSTCASFIVSGAGVPVAKHGNRALSSRSGAADVLASLGVRIDLRPEQVGRCVRE 145          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_THEPX (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A K+E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I++ PE  +R ++E
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDIEMVPEKTKRLIEE 144          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_THEP3 (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A K+E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I++ PE  +R ++E
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDIEMVPEKTKRLIEE 144          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPG (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain GB-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 54/136 (39.71%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  237 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVD 635
            ++  +DL+  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LEA G+ ++L P  V RC+D
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASAFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCID 145          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPL (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Lens) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 51/139 (36.69%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  225 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            L + L+SR DL+  + Q  +   +  E  +  I+ FL L+R KGET  E+   A+ M + A K++     +DIVGTGGDG NT N+ST  S + AA G KVAK             D+LE  G +++L    V+ C+++
Sbjct:    6 LFEQLLSRQDLSSDQMQEVIHACMTGEFSDVQIATFLALMRMKGETVNELTAAAKVMRQLAHKIDLGNPLIDIVGTGGDGRNTFNVSTACSFVVAAAGIKVAKHGNRSVSSRSGSADLLEQAGFILNLSDSQVQNCINQ 144          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 56/150 (37.33%), Postives = 78/150 (52.00%), Query Frame = 3
Query:  237 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            ++ R DLTE+E    +D +++ EA  A I+AF+  LR KGET  EI G AR M    T++                 L   +D  GTGG   NT N+ST  + + +ACG KVAK             DVLE+LGV +D+  E + RC++E
Sbjct:    9 VVEREDLTESEMIQVMDQVMSGEATPAQIAAFITALRMKGETVAEITGAARVMRDKVTRIRVGKNILDMDRDDINVDLETILDTCGTGGSCTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSACGSADVLESLGVNLDVTQETIERCINE 158          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_CLOAB (Anthranilate phosphoribosyltransferase OS=Clostridium acetobutylicum GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 58/130 (44.62%), Postives = 80/130 (61.54%), Query Frame = 3
Query:  255 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            L+E EA  +++ +++ +  E  ++AFL  LR KGE   EI+G ARAM ++A KVE     A+D  GTGGDG  T N+ST +SI+AAA G K+AK             DVL  LGV I+L PE V+R ++E
Sbjct:   15 LSENEAYGAMNEIMDGKVSEIDMAAFLTGLRMKGEEVEEILGCARAMKEHAVKVEVNNLYAIDTCGTGGDGGKTFNVSTCSSIIAAAGGVKIAKHGNRAGSSKSGSADVLTELGVSINLKPEEVKREIEE 144          
The following BLAST results are available for this feature:
BLAST of CK937934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_COREF9.302e-1946.02Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_VIBPA1.215e-1839.29Anthranilate phosphoribosyltransferase OS=Vibrio p... [more]
TRPD_PSYIN1.215e-1836.62Anthranilate phosphoribosyltransferase OS=Psychrom... [more]
TRPD_BRAJA1.215e-1841.01Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_THEPX1.587e-1840.43Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_THEP31.587e-1840.43Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_PSEPG1.587e-1839.71Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_LEGPL1.587e-1836.69Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_GEOUR1.587e-1837.33Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_CLOAB1.587e-1844.62Anthranilate phosphoribosyltransferase OS=Clostrid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004480_B03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937934 ID=CK937934; Name=CK937934; organism=Citrus sinensis; type=EST; length=641bp
GGGGAACAACAATGACTTTGNNNNNNTTGTTGAATTTAACTGCAGTTTCT
TCCTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTC
GCTTCGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAG
AATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGT
CCTCTAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGT
GGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATG
AAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAA
GGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTA
TGCTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAG
GAGGTGACGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTT
GCTGCAGCTTGTGGTACAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTC
TTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTG
ACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCA
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