CK937934

Overview
NameCK937934
Unique NameCK937934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_VESOH (Anthranilate phosphoribosyltransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=trpD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.457e-12
Identity = 43/142 (30.28%), Postives = 70/142 (49.30%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            + I  ++ + DL++ E Q  + D +  +  +   S FLV L  KGE+  EI  + + +  +   V  +     VD  GTGGDG    NIST  + + AA G  VAK             DVL+A GV +++  E + +C+++
Sbjct:    5 QAIKQIVKKQDLSQNEMQKVMNDIMTGKTTDTQTSGFLVGLAIKGESIDEITAVVKIIRSFTKSVTIKNTKHLVDTCGTGGDGLGLFNISTACAFVVAAAGGSVAKHGNRGISSKSGSADVLKAAGVNLNMSVERISKCIEK 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_NITMS (Anthranilate phosphoribosyltransferase OS=Nitrosopumilus maritimus (strain SCM1) GN=trpD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.457e-12
Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 3
Query:  219 NELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            ++LI  L  + DLT  E  Q   D L  +  ++  + FL  L  KGET  E++G+   M +++ K+E    G  +D+ GTGGD   T NIST AS + AA G  VAK             D+ E  G  ++L+P  +   +++
Sbjct:    3 SDLISKLQEKTDLTYDEMNQVMTDVLSGKTTDSENADFLSNLTDKGETDDELLGMLDKMQEFSLKIEPKNTGTIIDMCGTGGDKLQTFNISTTASFVVAAAGGVVAKHGNRSSSGISGSADIFEYFGYDLNLEPPKIAEILEK 145          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_THEEB (Anthranilate phosphoribosyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 47/129 (36.43%), Postives = 66/129 (51.16%), Query Frame = 3
Query:  216 FNELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDA-VDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGV 593
            +++L+  L+ R  LT+ +A Q    +L  E  +AL  A L  L+ KG T  E+ G+A  ++  +      L +  +D  GTGGD A T NIST  + + AA G KVAK             DVLE LGV
Sbjct:    2 WSDLLQQLLDRQALTQEQAAQLMQGWLAEEIPDALSGAILTALQLKGLTVEELTGMANVLLAQSAGAPLNLAEPLIDTCGTGGDRAGTFNISTAVAFVVAAAGVKVAKHGNRSVSSRVGSADVLETLGV 130          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PARDP (Anthranilate phosphoribosyltransferase OS=Paracoccus denitrificans (strain Pd 1222) GN=trpD PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 44/121 (36.36%), Postives = 59/121 (48.76%), Query Frame = 3
Query:  255 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPE 614
            LT  EA+A+   L    A  A I   L+ +R +GET  E+    RAM     +++    A+DIVGTGGDG  T+NIST  + + A  G  VAK             D L  LG+ +   PE
Sbjct:   19 LTGTEAEAAFGALFEGAATPAQIGGLLMAMRVRGETVEEMAAATRAMRARMNRIKAPEGAMDIVGTGGDGKGTLNISTATAFVVAGAGVPVAKHGNRNLSSKSGSADALTHLGLNVMSTPE 139          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_STRSV (Anthranilate phosphoribosyltransferase OS=Streptococcus sanguinis (strain SK36) GN=trpD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.101e-11
Identity = 49/141 (34.75%), Postives = 75/141 (53.19%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            E+I  L    DL+ AE    ++ ++     E+ I AFL+ L+ KGET  E   LA+ M  +A ++   +  A+D  GTGGD + + NIST A+ + A  G K+AK             DVLEALG+ +DLD   + +  ++
Sbjct:    3 EIIAKLADFKDLSSAEMTDVIERIVTGRVTESQIVAFLLGLKMKGETIEERTALAQVMRGHAKQIPTTIRTAMDNCGTGGDKSFSFNISTTAAFVLAGGGIKMAKHGNRSISSKSGSADVLEALGINLDLDAASLGKVFEQ 143          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PROM9 (Anthranilate phosphoribosyltransferase OS=Prochlorococcus marinus (strain MIT 9312) GN=trpD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.101e-11
Identity = 49/142 (34.51%), Postives = 71/142 (50.00%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            E+++ L+   +L E  +   +   LN E  +    AFL  LRAKG T  E+  +A  ++K         +   VD  GTGGDGANT NIST  + +AA+CG K+AK             DVL  LG+ ++   + V   V+E
Sbjct:    9 EILNILLEGGNLDELTSSLLMQRWLNDEISDVQTGAFLSALRAKGCTGVELSSMAEELLKVCELPVARPNLYMVDTCGTGGDGANTFNISTAVAFVAASCGAKIAKHGNKSASGKVGSADVLLNLGLNLNCSLKKVISAVNE 150          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_HALVO (Anthranilate phosphoribosyltransferase OS=Halobacterium volcanii GN=trpD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.101e-11
Identity = 52/144 (36.11%), Postives = 68/144 (47.22%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAT--KVEGLGDAVDIVGTGGDGANTVNI--STGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            + I+ +    DLT  EA+       +E A EA I A L  LRAKGET  EI G A+ M   A   +      + D  GTGGD  NT+N+   T  S  AA     VAK             DVLE  GV ++ +PE V  C+++
Sbjct:    3 DYIERVTGGADLTVEEARRPPRGRSSEDATEAQIGALLAALRAKGETEAEIAGFAQGMRDAALIHRARPAARSSDTAGTGGDDYNTINVLDPTTRSSAAAPGAAAVAKHGNYSVSSSSGSADVLEVAGVNVEAEPESVEACIED 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_THETH (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.438e-11
Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 3
Query:  255 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            L E EA   +  L+  E      +  LV L  +GE   EI  +ARAM + A  +       +DIVGTGGDG   +N+ST A+++AAA G  VAK             D+LEALGV ++  PE V   ++E
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEE 142          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_THET8 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpD PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.438e-11
Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 3
Query:  255 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            L E EA   +  L+  E      +  LV L  +GE   EI  +ARAM + A  +       +DIVGTGGDG   +N+ST A+++AAA G  VAK             D+LEALGV ++  PE V   ++E
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEE 142          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_THET2 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trpD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.438e-11
Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 3
Query:  255 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            L E EA   +  L+  E      +  LV L  +GE   EI  +ARAM + A  +       +DIVGTGGDG   +N+ST A+++AAA G  VAK             D+LEALGV ++  PE V   ++E
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEE 142          
The following BLAST results are available for this feature:
BLAST of CK937934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_VESOH6.457e-1230.28Anthranilate phosphoribosyltransferase OS=Vesicomy... [more]
TRPD_NITMS6.457e-1232.87Anthranilate phosphoribosyltransferase OS=Nitrosop... [more]
TRPD_THEEB8.433e-1236.43Anthranilate phosphoribosyltransferase OS=Thermosy... [more]
TRPD_PARDP8.433e-1236.36Anthranilate phosphoribosyltransferase OS=Paracocc... [more]
TRPD_STRSV1.101e-1134.75Anthranilate phosphoribosyltransferase OS=Streptoc... [more]
TRPD_PROM91.101e-1134.51Anthranilate phosphoribosyltransferase OS=Prochlor... [more]
TRPD_HALVO1.101e-1136.11Anthranilate phosphoribosyltransferase OS=Halobact... [more]
TRPD_THETH1.438e-1137.69Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET81.438e-1137.69Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET21.438e-1137.69Anthranilate phosphoribosyltransferase OS=Thermus ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004480_B03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937934 ID=CK937934; Name=CK937934; organism=Citrus sinensis; type=EST; length=641bp
GGGGAACAACAATGACTTTGNNNNNNTTGTTGAATTTAACTGCAGTTTCT
TCCTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTC
GCTTCGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAG
AATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGT
CCTCTAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGT
GGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATG
AAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAA
GGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTA
TGCTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAG
GAGGTGACGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTT
GCTGCAGCTTGTGGTACAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTC
TTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTG
ACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCA
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