CK937934

Overview
NameCK937934
Unique NameCK937934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_BACCA (Anthranilate phosphoribosyltransferase (Fragment) OS=Bacillus caldotenax GN=trpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.453e-19
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 3
Query:  255 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVD 635
            LTE EA A+++ +++ EA ++ I++ L +LR +GET  E+VG  RAM    T +E   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   P   ++ ++
Sbjct:   15 LTEDEAYAAMNIIMSGEATDSQIASLLSMLRLRGETVDELVGFVRAMRDRMTAIEASDDVIDTCGTGGDGAATFNVSTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGIDIHTSPSAAKQALE 142          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_AGRT5 (Anthranilate phosphoribosyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.453e-19
Identity = 55/130 (42.31%), Postives = 72/130 (55.38%), Query Frame = 3
Query:  255 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            L   +A+ + D L++ EA  + I  FL+ LR +GET  EIVG   +M      V    +A+DIVGTGGDG  T NIST ASI+ A  G  VAK             D L ALGV +D+ P+ + RC+ EA
Sbjct:   17 LNREDARTAFDILMSGEATPSQIGGFLMALRVRGETVDEIVGAVSSMRARMLPVSAPANAIDIVGTGGDGIGTYNISTLASIITAGTGLPVAKHGNRALSSKSGTADALSALGVRLDIGPDLIARCIAEA 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_VIBCH (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae GN=trpD PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.122e-19
Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 3
Query:  225 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            +I+ L  +  LT+AE+Q   D ++  E D  L++A L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG+NT+NIST A+ +AAACG KVAK             D+L + G+ + +  +  R+ +D+
Sbjct:    4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDD 143          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_VIBC3 (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.122e-19
Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 3
Query:  225 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            +I+ L  +  LT+AE+Q   D ++  E D  L++A L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG+NT+NIST A+ +AAACG KVAK             D+L + G+ + +  +  R+ +D+
Sbjct:    4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDD 143          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PSEFS (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.122e-19
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  237 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVD 635
            ++  +DL+ AE +    + +  +  +A I AF++ +R K E+  EIVG    M + A KVE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D
Sbjct:   10 IVGHLDLSTAEMSDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCID 145          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_MYCS2 (Anthranilate phosphoribosyltransferase OS=Mycobacterium smegmatis GN=trpD PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.122e-19
Identity = 62/147 (42.18%), Postives = 82/147 (55.78%), Query Frame = 3
Query:  210 PCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLG-DAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            P +  ++  L +  +L    A  ++D ++   A  A IS F V ++ K  T  E+  LA  M+ +A +V  + +G D VDIVGTGGDGANTVN+ST ASI+ AACG  V K             D LEALGV IDL P+ V R V E
Sbjct:   19 PSWPRILGRLTTGQNLPNGHAAWAMDQIMTGAATPAQISGFAVSMKMKRPTASEVRELADIMLTHARRVPTDEIGTDTVDIVGTGGDGANTVNLSTMASIVVAACGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDDVARSVRE 165          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_RHORT (Anthranilate phosphoribosyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.302e-19
Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 3
Query:  255 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            L+EA+A  + + +++  A  A I  FL+ LR +GET  EI   AR M   A +++    A+DIVGTGGD A T NIST A+++ AACG  VAK             DVL ALGV +D D   V R + E
Sbjct:   24 LSEADATRAFEAIMSGNATPAQIGGFLMALRVRGETVAEITAAARTMRDKAARIQAPAGAIDIVGTGGDCAGTYNISTAAALVTAACGVPVAKHGNRAASSKSGSADVLAALGVNLDADLALVERSIAE 152          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPW (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain W619) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.302e-19
Identity = 55/136 (40.44%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  237 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVD 635
            ++  +DL+  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVGRCID 145          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PSEMY (Anthranilate phosphoribosyltransferase OS=Pseudomonas mendocina (strain ymp) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.302e-19
Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVD 635
            E ++ +++++DLT  E QA + + +  +  +A I AFL+ +R K ET  EIVG A  M + A  V  + DA   VD  GTGGDG N  N+ST A+ + AA G KVAK             D+LEA GV + L PE V RCV+
Sbjct:    5 EALNRIVAQLDLTTEEMQAVMREIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAASVMRELAAPV--VIDAERLVDTCGTGGDGMNIFNVSTAAAFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVYLGLKPEQVARCVE 144          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PSEF5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.302e-19
Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = 3
Query:  237 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVD 635
            ++  +DL+  E ++ + + +  +  +A I AF++ +R K E+  EIVG   AM + A +VE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D
Sbjct:   10 IVGHLDLSTEEMRSVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSAMRELADRVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCID 145          
The following BLAST results are available for this feature:
BLAST of CK937934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BACCA5.453e-1939.84Anthranilate phosphoribosyltransferase (Fragment) ... [more]
TRPD_AGRT55.453e-1942.31Anthranilate phosphoribosyltransferase OS=Agrobact... [more]
TRPD_VIBCH7.122e-1939.29Anthranilate phosphoribosyltransferase OS=Vibrio c... [more]
TRPD_VIBC37.122e-1939.29Anthranilate phosphoribosyltransferase OS=Vibrio c... [more]
TRPD_PSEFS7.122e-1938.97Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_MYCS27.122e-1942.18Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_RHORT9.302e-1942.64Anthranilate phosphoribosyltransferase OS=Rhodospi... [more]
TRPD_PSEPW9.302e-1940.44Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEMY9.302e-1941.55Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEF59.302e-1938.24Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004480_B03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937934 ID=CK937934; Name=CK937934; organism=Citrus sinensis; type=EST; length=641bp
GGGGAACAACAATGACTTTGNNNNNNTTGTTGAATTTAACTGCAGTTTCT
TCCTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTC
GCTTCGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAG
AATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGT
CCTCTAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGT
GGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATG
AAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAA
GGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTA
TGCTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAG
GAGGTGACGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTT
GCTGCAGCTTGTGGTACAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTC
TTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTG
ACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCA
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