CK937864

Overview
NameCK937864
Unique NameCK937864
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937864 vs. ExPASy Swiss-Prot
Match: DYL1_ASHGO (Dynein light chain 1, cytoplasmic OS=Ashbya gossypii GN=DYN2 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.327e-20
Identity = 42/85 (49.41%), Postives = 61/85 (71.76%), Query Frame = 3
Query:    6 KRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKS 260
            K  ++K++D+ ++L+ E   I++ A E+  +E++VA  IKK+ D KHG TWH IVG NFGSYVTHE  HF+YFY+   A L+FK+
Sbjct:    3 KPAILKASDITDELRDEIFGISVQAVEQFQLEREVAAYIKKELDSKHGQTWHVIVGKNFGSYVTHEKGHFIYFYIGPLAFLVFKT 87          
BLAST of CK937864 vs. ExPASy Swiss-Prot
Match: DYL1_YEAST (Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae GN=DYN2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.101e-18
Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 3
Query:   15 VIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKS 260
            ++K++D+ + L+++ + I+  A +K  +E+D+A  +KK  D K+G TWH IVG NFGSYVTHE  HFVYFY+   A L+FK+
Sbjct:   10 IVKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFGSYVTHEKGHFVYFYIGPLAFLVFKT 91          
BLAST of CK937864 vs. ExPASy Swiss-Prot
Match: DYL1_CANGA (Dynein light chain 1, cytoplasmic OS=Candida glabrata GN=DYN2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.101e-18
Identity = 39/84 (46.43%), Postives = 63/84 (75.00%), Query Frame = 3
Query:    9 RVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKS 260
            +V++K++DM +++Q+E   IA  A  ++++E+++A  IKK+ D ++G TWH IVG +FGSYVTHE   FVYFY+   A+L+FK+
Sbjct:    3 QVIVKASDMGDEMQQEVFRIAEEAMREHTLEREIASVIKKEMDSRYGHTWHVIVGRSFGSYVTHEKGKFVYFYVGPLALLVFKT 86          
BLAST of CK937864 vs. ExPASy Swiss-Prot
Match: DYL1_DEBHA (Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii GN=DYN2 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.908e-18
Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = 3
Query:   15 VIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 263
            ++K++D+ E++Q    +++  A     +EKD+A  +KK+ D+ +G TWH IVG +FGSYVTHE   F YFY+ Q A L+FKSG
Sbjct:    9 ILKASDLPEEMQTRIFELSNEAVSNYKIEKDIATYLKKELDQLYGATWHVIVGKSFGSYVTHEQGFFTYFYIGQLAFLIFKSG 91          
BLAST of CK937864 vs. ExPASy Swiss-Prot
Match: DYL1_KLULA (Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis GN=DYN2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.444e-16
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 3
Query:   15 VIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKS 260
            V+K++D+ ++L+ E  +++  A     +E+++A  IKK  D   G TWH IVG NFGSYVTHE  +FVYFY+   A L+FK+
Sbjct:    5 VLKASDITDELRDEIFELSSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFLVFKT 86          
The following BLAST results are available for this feature:
BLAST of CK937864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DYL1_ASHGO4.327e-2049.41Dynein light chain 1, cytoplasmic OS=Ashbya gossyp... [more]
DYL1_YEAST3.101e-1847.56Dynein light chain 1, cytoplasmic OS=Saccharomyces... [more]
DYL1_CANGA3.101e-1846.43Dynein light chain 1, cytoplasmic OS=Candida glabr... [more]
DYL1_DEBHA6.908e-1845.78Dynein light chain 1, cytoplasmic OS=Debaryomyces ... [more]
DYL1_KLULA8.444e-1645.12Dynein light chain 1, cytoplasmic OS=Kluyveromyces... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_A05 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937864 ID=CK937864; Name=CK937864; organism=Citrus sinensis; type=EST; length=532bp
GGGGAAAACGAGTCGTTATTAAGAGCGCCGACATGAAAGAGGACCTGCAA
AAGGAGGCTGTTGATATTGCTATTGCAGCATTTGAGAAGAACAGTGTAGA
GAAAGATGTAGCTGAGAGGATAAAGAAGGATTTTGATAAGAAGCATGGAC
CTACTTGGCACTGTATTGTCGGTAGCAATTTTGGTTCATATGTGACTCAC
GAAACAAACCACTTTGTTTATTTCTATTTGGATCAGAAAGCAGTTTTGCT
ATTCAAATCCGGTTAGCCCAATGTCGAGAAAGATGGTGGATTGTGGTTCG
GATGATGAGTTTACGTTCCAAATGCTATAAATATTGTCTGTATGTAGTAA
TTGAAATCTTTACATGGAGATTCTTGAGCCTAAGTTGTATATTTGAATTC
GCTTGGAACTGGTTTGATACTTCAAAATGGATGTGCACTGCAGTTTTTAG
TTGAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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