CK937838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_MYTCH (Histone H2A OS=Mytilus chilensis PE=3 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 4.958e-21 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_MYTCA (Histone H2A OS=Mytilus californianus PE=3 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 4.958e-21 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_TIGCA (Histone H2A OS=Tigriopus californicus GN=His2A PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21 Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_RHYAM (Histone H2A OS=Rhynchosciara americana GN=His2A PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21 Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_PLADU (Histone H2A OS=Platynereis dumerilii PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21 Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_ONCMY (Histone H2A OS=Oncorhynchus mykiss PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21 Identity = 52/82 (63.41%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LAVRNDEEL KLL GVTIA GGVLPNI VLLPKK+ Sbjct: 40 YAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_DROYA (Histone H2A OS=Drosophila yakuba GN=His2A PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21 Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_DROSI (Histone H2A OS=Drosophila simulans GN=His2A PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21 Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_DROME (Histone H2A OS=Drosophila melanogaster GN=His2A PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21 Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_DROHY (Histone H2A OS=Drosophila hydei GN=His2A PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21 Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120 The following BLAST results are available for this feature:
BLAST of CK937838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937838 ID=CK937838; Name=CK937838; organism=Citrus sinensis; type=EST; length=525bpback to top |